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The map label for this gene is yadK [H]

Identifier: 218688013

GI number: 218688013

Start: 157002

End: 157598

Strand: Reverse

Name: yadK [H]

Synonym: ECED1_0141

Alternate gene names: 218688013

Gene position: 157598-157002 (Counterclockwise)

Preceding gene: 218688014

Following gene: 218688012

Centisome position: 3.03

GC content: 42.88

Gene sequence:

>597_bases
ATGCGTCCCACTCAACGTAATCTGATGAAAAAATCAATTCTGATTCTGTCGTTGCTATTCAGCGCCACTTCCCCTGTGGT
TGCAGGACAGGATGTTGACATTGTTGCAAATATAAAAAATAACACCTGCCAAAGTGGAATCAGCAACAACGGAAATATTG
ATTTAGGTGTCGTTGGCGTGGGCGATTTTACCGGAAACATTTCAGCCGAAAATTATCACCCCGGTGGAAAAGAGTTCACT
ATTACAGTACAGGACTGCACACTTCAGGGCACAGGGAATGTGTTAAATCAGTTACATATTAATTTTCGCGCACTTAGTGG
CGTAATGGCGACAGGTTCCAGTCAAATATTCGCTAATGAAGACAACGCCGGGGCTAAAAATGTTGGGGTAGTTATATTTT
CTATTCAGGACCCGGCAAATACCTTCAACGTTCTTAGTGCCACTGGTAGCTCACGTTCCGTTTATCCGGTCATGTCATCA
GCACTAAATAATTCATCCTGGAAATTTAGTACCCGAATGCAAAAAATCGATCCAGCACTGAATGTCACCTCTGGCCCACT
GATAAGCCATGTGTTAGTGGATATCTACTACGAATAA

Upstream 100 bases:

>100_bases
AAGATAAAACTGTCACAAATGTCACTGCGGGTGATTTCACTGCCCCAGCAACATTCACCGTGACTTATAACTAACAGGCA
GACTGATTCAGGAACTAAAT

Downstream 100 bases:

>100_bases
CAGACAAAGTGCTACAAGTATTATCTTGCAGCATGACAATGGAGTAAAAATGAAGACATTCTTCAGATACTTTCTTTTTT
TAGCACTATGCTCTTGTTGT

Product: protein yadK, putative fimbrial-like adhesin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRPTQRNLMKKSILILSLLFSATSPVVAGQDVDIVANIKNNTCQSGISNNGNIDLGVVGVGDFTGNISAENYHPGGKEFT
ITVQDCTLQGTGNVLNQLHINFRALSGVMATGSSQIFANEDNAGAKNVGVVIFSIQDPANTFNVLSATGSSRSVYPVMSS
ALNNSSWKFSTRMQKIDPALNVTSGPLISHVLVDIYYE

Sequences:

>Translated_198_residues
MRPTQRNLMKKSILILSLLFSATSPVVAGQDVDIVANIKNNTCQSGISNNGNIDLGVVGVGDFTGNISAENYHPGGKEFT
ITVQDCTLQGTGNVLNQLHINFRALSGVMATGSSQIFANEDNAGAKNVGVVIFSIQDPANTFNVLSATGSSRSVYPVMSS
ALNNSSWKFSTRMQKIDPALNVTSGPLISHVLVDIYYE
>Mature_198_residues
MRPTQRNLMKKSILILSLLFSATSPVVAGQDVDIVANIKNNTCQSGISNNGNIDLGVVGVGDFTGNISAENYHPGGKEFT
ITVQDCTLQGTGNVLNQLHINFRALSGVMATGSSQIFANEDNAGAKNVGVVIFSIQDPANTFNVLSATGSSRSVYPVMSS
ALNNSSWKFSTRMQKIDPALNVTSGPLISHVLVDIYYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786329, Length=198, Percent_Identity=76.7676767676768, Blast_Score=319, Evalue=8e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21056; Mature: 21056

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTQRNLMKKSILILSLLFSATSPVVAGQDVDIVANIKNNTCQSGISNNGNIDLGVVGV
CCCHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEE
GDFTGNISAENYHPGGKEFTITVQDCTLQGTGNVLNQLHINFRALSGVMATGSSQIFANE
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHEEEEEEEEEEEECCCCEEEECC
DNAGAKNVGVVIFSIQDPANTFNVLSATGSSRSVYPVMSSALNNSSWKFSTRMQKIDPAL
CCCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHCCCCEEEEHHHHHCCCCC
NVTSGPLISHVLVDIYYE
CCCCCHHHHEEEEEEECC
>Mature Secondary Structure
MRPTQRNLMKKSILILSLLFSATSPVVAGQDVDIVANIKNNTCQSGISNNGNIDLGVVGV
CCCHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEE
GDFTGNISAENYHPGGKEFTITVQDCTLQGTGNVLNQLHINFRALSGVMATGSSQIFANE
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHEEEEEEEEEEEECCCCEEEECC
DNAGAKNVGVVIFSIQDPANTFNVLSATGSSRSVYPVMSSALNNSSWKFSTRMQKIDPAL
CCCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHCCCCEEEEHHHHHCCCCC
NVTSGPLISHVLVDIYYE
CCCCCHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]