| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yacH [H]
Identifier: 218687995
GI number: 218687995
Start: 135551
End: 137308
Strand: Reverse
Name: yacH [H]
Synonym: ECED1_0121
Alternate gene names: 218687995
Gene position: 137308-135551 (Counterclockwise)
Preceding gene: 218687998
Following gene: 218687986
Centisome position: 2.64
GC content: 53.75
Gene sequence:
>1758_bases ATGAAAATGACTTTGCCGTTTAAACCCCATGTGCTGGCGCTAATTTGCAGTGCCGGGCTTTGTGCCGCCTCTGCCGGGCT ATATATAAAAAGCCGCACAGTGGAAGCGCCTGTGGAAGCGCAATCGACACAACAGACTGCGCCTGACATCTCCGCAGTTA CGCTTCCTGCAACGGTTTCCGTGCCTCCTGTAACACCTGCCGTCGTCAAATCCGCATTCAGCACTGCACAAATCGATCAA TGGGTCGCGCCCGTCGCGCTGTACCCCGACTCTCTGCTTTCACAAGTGTTAATGGCATCAACCTATCCGGCAAACGTTGC TCAAGCAGTGCAATGGTCACACGATAATCCACTTAAACAAGGCGATGCTGCTATTCAGGCTGTATCCGACCAGCCCTGGG ACGCCAGCGTCAAATCACTGGTGGCCTTTCCACAGTTGATGGCATTGATGGGCGAAAACCCGCAATGGGTGCAAAACCTG GGCGATGCTTTTCTGGCGCAGCCGCAGGACGTGATGGACTCGGTACAGCGATTGCGGCAACTGGCGCAACAAACCGGCTC GCTGAAGTCATCAACTGAACAAAAGATCATCACGACAACGAAAAAAGTCGTACCGGTAAATCAGCCCGCCAACGCCCCTG CCACACAATCAAATACCGTTTCTACGTCCAGCCCCGTCGTCGCAGAACCTGCACCGACCGTAATAACCATTGAGCCAGCC AATCCGGATGTGGTTTATATTCCGAACTACAACCCAAACGTGGTTTACGGCAGTTGGGCCAATACCGCTTATCCGCCAGT TTATCTGCCGCCGCCAGCCGGAGAACCGTTTGTTGACAGCTTTGTGCGCGGATTCGGCTATAGCATGGGCGTTGCTACCA CATACGCACTATTCAGCAGCATCGACTGGGACGACGATGATCATGACCATCATCATCATGACGATGATGATTATCATCAC CACGATGGCGGTCATCGTGACGGTAATGACTGGCAACACAACGGCGACAACATCAATATCGACGTCAACAATTTCAACCG TATCACCGGTGAGCATCTTACTGATAAGAATATGGCATGGCGGCACAATCCAAACTACCGTAATGGTATGCCTTATCATG ATCAGGATATGACAAAACGGTTTCACCAAACCGATGTTAAAGGCGGAATGAGCGCCACGCCGCTACCTGCTCCAACACGC GACAGCCAGCGTCAGGCGGCAGCAAGCCAGTTTCAGCAACGAACACACGCAGCACCAGTCACTACGCGAGATACCCAGCG TCAGGCTGCGGCACAGCGGTTTAATGAAGCGGAACACTATGGCAATTATGACGACTTCCGCGACTTCAGCCACCACCAAC CACTGACCCAGCAGCAAAAGGACGCCGCTCGTCAGCGTTATCAGTCGGCTTCTCCTGAGCAGCGCCAGGCAGTCCGCGAG AAAATTCAGGCTAACCCGCAGAATCAGCAGAGAAGAGAAGCGGCACATCAGCGTATTCAGTCCGCGTCGCCTGAGCAGCG CCAGGCGGTTCGCGAGAAAATGCAGACTAACCCGCAGAATCAACAGCAAAGAGATGCAGCACGTCAGCGTATCCAGTCTG CCTCGCCTGAGCAGCGTCAGGTTTTTCGAGAGAAAGTTCAGGAGAGCCGCCCGCAGCGTCTAAACGACAGTAACCATACT GCCCGATTGAATAATGAGCAACGGTCAGCGGTACGCGAACGGTTGTCTGAGCGTGGAGCAAGGAGACTGGAAAGGTAA
Upstream 100 bases:
>100_bases AGATTAGTCAAAATTTAAACTACCGCCTCTTTATACTCGGATTCACAGCACCTGCGGGTGGCAGTTCGCCGACCATTGCG ATTTCCTTGAGATCCGAATT
Downstream 100 bases:
>100_bases ATTGCAGGCGTAAAAAAGCGGCGTTGTTAGCCGCTTAAGACTGATGACAAACATCGAATCGCCCGATGCGCAAGCTTATC GGGCCTACATAAGCCATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVEAQSTQQTAPDISAVTLPATVSVPPVTPAVVKSAFSTAQIDQ WVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHH HDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGMPYHDQDMTKRFHQTDVKGGMSATPLPAPTR DSQRQAAASQFQQRTHAAPVTTRDTQRQAAAQRFNEAEHYGNYDDFRDFSHHQPLTQQQKDAARQRYQSASPEQRQAVRE KIQANPQNQQRREAAHQRIQSASPEQRQAVREKMQTNPQNQQQRDAARQRIQSASPEQRQVFREKVQESRPQRLNDSNHT ARLNNEQRSAVRERLSERGARRLER
Sequences:
>Translated_585_residues MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVEAQSTQQTAPDISAVTLPATVSVPPVTPAVVKSAFSTAQIDQ WVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHH HDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGMPYHDQDMTKRFHQTDVKGGMSATPLPAPTR DSQRQAAASQFQQRTHAAPVTTRDTQRQAAAQRFNEAEHYGNYDDFRDFSHHQPLTQQQKDAARQRYQSASPEQRQAVRE KIQANPQNQQRREAAHQRIQSASPEQRQAVREKMQTNPQNQQQRDAARQRIQSASPEQRQVFREKVQESRPQRLNDSNHT ARLNNEQRSAVRERLSERGARRLER >Mature_585_residues MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVEAQSTQQTAPDISAVTLPATVSVPPVTPAVVKSAFSTAQIDQ WVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHH HDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGMPYHDQDMTKRFHQTDVKGGMSATPLPAPTR DSQRQAAASQFQQRTHAAPVTTRDTQRQAAAQRFNEAEHYGNYDDFRDFSHHQPLTQQQKDAARQRYQSASPEQRQAVRE KIQANPQNQQRREAAHQRIQSASPEQRQAVREKMQTNPQNQQQRDAARQRIQSASPEQRQVFREKVQESRPQRLNDSNHT ARLNNEQRSAVRERLSERGARRLER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786308, Length=617, Percent_Identity=86.2236628849271, Blast_Score=1031, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021728 [H]
Pfam domain/function: PF11737 DUF3300 [H]
EC number: NA
Molecular weight: Translated: 65400; Mature: 65400
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVEAQSTQQTAPDISAVTLPATVS CCCCCCCCHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCCEEEECCEEC VPPVTPAVVKSAFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH GDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA HHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECC NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSS CCCEEEECCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH IDWDDDDHDHHHHDDDDYHHHDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC RHNPNYRNGMPYHDQDMTKRFHQTDVKGGMSATPLPAPTRDSQRQAAASQFQQRTHAAPV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC TTRDTQRQAAAQRFNEAEHYGNYDDFRDFSHHQPLTQQQKDAARQRYQSASPEQRQAVRE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH KIQANPQNQQRREAAHQRIQSASPEQRQAVREKMQTNPQNQQQRDAARQRIQSASPEQRQ HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH VFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER HHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVEAQSTQQTAPDISAVTLPATVS CCCCCCCCHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCCEEEECCEEC VPPVTPAVVKSAFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH GDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA HHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECC NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSS CCCEEEECCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH IDWDDDDHDHHHHDDDDYHHHDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC RHNPNYRNGMPYHDQDMTKRFHQTDVKGGMSATPLPAPTRDSQRQAAASQFQQRTHAAPV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC TTRDTQRQAAAQRFNEAEHYGNYDDFRDFSHHQPLTQQQKDAARQRYQSASPEQRQAVRE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH KIQANPQNQQRREAAHQRIQSASPEQRQAVREKMQTNPQNQQQRDAARQRIQSASPEQRQ HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH VFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER HHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]