Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

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The map label for this gene is ydiD

Identifier: 218558571

GI number:

Start: 1746997

End: 1748697

Strand: Direct

Name: ydiD

Synonym: ECS88_1752

Alternate gene names: NA

Gene position: NA

Preceding gene: 218558570

Following gene: 218558573

Centisome position: NA

GC content: NA

Gene sequence:

>1701_bases
ATGCATCCCACAGGCCCGCATCTCGGGCCTGATGTTCTGTTTCGAGAGTCCAAAATGAAAGTGACATTAACGTTCAACGA
ACAACGTCGTGCGGCGTATCGTCAGCAAGGGTTATGGGGCGATGCTTCGCTGGCCGATTACTGGCAGCAGACCGCTCGTG
CGATGCCAGACAAAATTGCCGTGGTCGACAATCATGGTGCAACGTACACCTATAGCGCGCTCGATCACGCCGCGAGCTGT
CTGGCAAACTGGATGTTAGCGAAGGGTATTGAATCAGGCGATCGCATCGCATTTCAACTGCCAGGCTGGTGTGAATTTAC
CGTTATCTATCTTGCCTGCCTGAAAACCGGTGCGGTTTCCGTGCCGCTGTTACCTTCCTGGCGGGAAGCAGAACTGGTAT
GGGTGCTCAATAAGTGTCAGGCAAAAATGTTCTTTGCACCGACGTTGTTTAAACAAACGCGTCCAGTAGATTTAATCCTG
CCGCTGCAAAATCAGCTTCCACAACTACAACAAATTGTCGGCGTGGACAAACTGGCTCCCGCCACCTCTTCCCTCTCATT
AAGTCAGATTCTCGCCGACAATACCCCTCTGACCACGGCGATAACGACCCACGGCGATGAATTAGCCGCTGTGCTATTTA
CCTCCGGAACCGAGGGTCTGCCAAAGGGTGTGATGCTAACGCATAACAATATTCTCGCCAGTGAGCGGGCTTATTGCGCG
CGGCTAAATCTGACCTGGCAGGATGTCTTTATGATGCCTGCGCCACTTGGTCACGCAACGGGCTTTCTGCATGGCGTAAC
AGCACCTTTTTTGATTGGTGCTCGCAGCGTGTTGTTAGATATTTTCACTCCTGATGCGTGTCTCGCGCTGCTTGAGCAGC
AGCGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATTTACTAGAGAAACAACCCGCAGACCTT
TCAGCGCTGCGCTTCTTTCTTTGCGGAGGTACCACAATCCCCAAAAAAGTGGCGCGAGAATGCCAGCAGCGCGGCATTAA
ATTATTAAGTGTTTATGGTTCCACAGAAAGTTCGCCGCATGCGGTGGTGAATCTCGACGATCCTTTGCCGCGCTTTATGC
ACACCGACGGTTACGCTGCCGCAGGTGTAGAGATTAAAGTGGTCGATGACGCACGCAAGACTTTACCGCCAGGTTGCGAA
GGTGAAGAAGCCTCGCGTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCGCTGGATGA
AGAAGGCTGGTATTACAGCGGCGATCTCTGCCGCATGGATGAGGCTGGCTATATAAAAATAACCGGGCGCAAGAAAGATA
TTATTGTCCGCGGCGGCGAAAATATTAGCAGCCGTGAAGTAGAAGATATTTTATTGCAGCATCCTAAAATTCACGATGCC
TGTGTGGTTGCGATGCCCGATGAACGTTTAGGTGAACGTTCATGCGCTTATGTCGTGCTGAAAGCGCCGCATCATTCATT
ATCGCTGGAAGAGGTGGTGGCTTTTTTTAGCCGTAAACGGGTCGCGAAATATAAATATCCTGAACATATCGTGGTAATCG
AAAAACTACCGCGCACTGTCTCAGGTAAAATACAAAAGTTTTTGTTAAGGAAAGATATTATGCGGCGATTAACTCAGGAT
GTCTGTGAAGAGATTGAATAA

Upstream 100 bases:

>100_bases
TGGAGTGCGGCACCTGTCGGGTGCTGTGCGGCAACACTATTCTCGAACAGTGGCAATATCCCGCAGGCACCTTCGGTATT
GAATTTCGCTACGGCTAATC

Downstream 100 bases:

>100_bases
GTTTCATCTTCGGGGATCACATAAACCCGGCGACAAAACGCCGCCGGGTATTTATTTTATTTCTTCAGTTCAGCCAGGCT
TAACCAGGTTTGCACCACGG

Product: short chain acyl-CoA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>566_residues
MHPTGPHLGPDVLFRESKMKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVDNHGATYTYSALDHAASC
LANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKTGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLIL
PLQNQLPQLQQIVGVDKLAPATSSLSLSQILADNTPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCA
RLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNLLEKQPADL
SALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLPRFMHTDGYAAAGVEIKVVDDARKTLPPGCE
GEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDA
CVVAMPDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTVSGKIQKFLLRKDIMRRLTQD
VCEEIE

Sequences:
NA

Specific function: NA

COG id: COG0318

COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA