Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

Click here to switch to the map view.

The map label for this gene is mfd

Identifier: 218557995

GI number:

Start: 1156474

End: 1159920

Strand: Reverse

Name: mfd

Synonym: ECS88_1128

Alternate gene names: NA

Gene position: NA

Preceding gene: 218557996

Following gene: 218557994

Centisome position: NA

GC content: NA

Gene sequence:

>3447_bases
ATGCCTGAACAATATCGTTATACGCTGCCCGTCAAAGCGGGTGAGCAGCGTCTGCTGGGCGAGTTAACTGGCGCTGCCTG
CGCAACGCTGGTAGCGGAAATTGCCGAACGTCACGCCGGACCAGTGGTGCTTATTGCGCCAGATATGCAAAATGCTCTGC
GTTTGCATGATGAAATCAGCCAGTTCACCGATCAGATGGTGATGAACCTGGCGGACTGGGAAACCCTCCCTTACGACAGT
TTTTCGCCTCATCAGGACATTATCTCCTCGCGCCTTTCCACCCTTTACCAGCTACCGACGATGCAGCGTGGCGTACTGAT
TGTTCCGGTGAATACGCTTATGCAGCGCGTTTGCCCGCACAGTTTTCTCCACGGTCATGCGCTGGTGATGAAAAAAGGTC
AGCGCCTGTCACGAGATGCATTACGAACCCAACTGGACAGCGCCGGTTATCGCCATGTTGACCAGGTGATGGAGCACGGC
GAATACGCCACGCGCGGCGCGTTGCTGGATCTCTTCCCGATGGGGAGTGAGCTGCCTTATCGTCTTGATTTCTTTGATGA
TGAAATCGACAGCCTGCGGGTGTTTGACGTCGATAGCCAGCGCACGCTGGAGGAAGTAGAAGCGATCAATCTGCTTCCCG
CGCACGAATTTCCGACCGATAAAGCGGCAATTGAACTGTTCCGCAGCCAGTGGCGTGATACCTTCGAAGTGAAGCGCGAC
CCGGAACATATTTATCAGCAAGTGAGTAAAGGCACATTACCTGCCGGGATCGAGTACTGGCAGCCGCTATTCTTCAGCGA
ACCGCTGCCGCCACTGTTCAGTTATTTCCCTGCCAATACGCTGTTGGTGAATACTGGCGATCTGGAAAACAGTGCCGAAC
GTTTCCAGGCTGACACGCTGGCGCGTTTTGAGAATCGCGGCGTCGACCCAATGCGCCCACTGTTGCCACCACAATCGCTC
TGGCTGCGGGTGGATGAGCTCTTTTCAGAGCTGAAAAACTGGCCGCGTGTGCAGCTAAAAACTGAACATTTACCGACAAA
AGCAGCGAATGCCAATTTAGGTTTCCAGAAACTGCCAGACCTGGCCATTCAGGCACAACAAAAAGCGCCGCTGGATGCGC
TGCGTAAGTTCCTCGAGACTTTCGACGGTCCGGTGGTGTTCTCGGTAGAAAGTGAAGGTCGCCGTGAAGCGCTGGGTGAA
CTGCTCGCGCGAATTAAAATTGCTCCGCAACGCATTATGCGTCTTGATGAAGCCAGCGACCGTGGGCGTTATCTGATGAT
TGGCGCTGCCGAACATGGTTTTGTCGATACGATGCGTAACCTGGCGCTGATTTGCGAAAGCGATCTGCTCGGTGAACGCG
TTGCCCGTCGTCGTCAGGATTCTCGCCGCGCCATCAACCCCGATACACTGATCCGTAACCTTGCGGAGCTGCATATTGGT
CAGCCGGTGGTCCATCTGGAGCACGGCGTCGGTCGTTATGCCGGAATGACCACGCTCGAAGCTGGAGGCATTACTGGCGA
GTATTTGATGCTCACCTATGCCAACGACGCCAAACTGTATGTTCCGGTGTCGTCACTGCATCTGATTAGCCGTTACGCGG
GTGGCGCAGAAGAAAACGCACCACTGCATAAACTTGGTGGCGATGCCTGGTCACGCGCACGGCAGAAAGCGGCGGAAAAA
GTGCGTGATGTGGCGGCGGAATTGCTGGATATCTACGCGCAACGCGCCGCCAAAGAGGGCTTCGCGTTTAAACACGATCG
TGAGCAGTATCAGTTATTCTGCGACAGCTTCCCGTTTGAAACCACGCCGGATCAGGCTCAAGCCATTAATGCGGTGCTTA
GCGACATGTGTCAGCCGCTGGCAATGGATCGTCTGGTGTGCGGCGATGTTGGCTTTGGTAAAACAGAAGTGGCGATGCGC
GCCGCTTTCCTGGCGGTAGATAACCACAAACAGGTGGCGGTGCTGGTGCCTACCACCCTTCTCGCGCAGCAGCATTACGA
CAACTTCCGCGACCGTTTCGCCAACTGGCCGGTACGTATCGAAATGATCTCCCGTTTCCGCAGCGCCAAAGAGCAGACGC
AAATCCTTGCGGAAGTGGCGGAAGGGAAAATCGATATTCTGATCGGTACGCACAAACTGCTGCAAAGTGACGTCAAGTTT
AAAGATTTAGGCCTGCTGATTGTCGATGAAGAACACCGCTTCGGGGTGCGTCATAAAGAGCGCATTAAAGCGATGCGCGC
GAACGTGGATATTCTGACGCTTACCGCAACGCCGATCCCACGTACGCTGAATATGGCAATGAGCGGAATGCGCGATCTGT
CGATTATCGCCACGCCGCCCGCCCGTCGTCTGGCAGTTAAAACCTTTGTCCGTGAGTATGACAGTCTGGTGGTCCGGGAG
GCGATCCTGCGTGAAATTTTGCGCGGAGGACAGGTTTATTATCTCTACAATGATGTGGAAAACATCCAGAAAGCCGCCGA
ACGGCTGGCAGAACTGGTACCTGAAGCGCGGATTGCCATCGGTCACGGGCAAATGCGTGAGCGCGAACTGGAACGGGTGA
TGAATGATTTCCATCATCAACGTTTCAACGTGCTGGTTTGTACCACCATTATCGAAACCGGGATCGACATTCCTACCGCC
AACACCATTATCATTGAACGCGCGGATCACTTCGGTCTGGCACAGTTGCACCAGTTGCGCGGTCGCGTCGGGCGTTCTCA
CCACCAGGCATATGCATGGCTACTGACGCCGCATCCAAAAGCGATGACTACCGATGCGCAAAAACGTCTTGAAGCGATTG
CCTCGCTGGAAGATCTCGGTGCAGGTTTTGCGCTGGCAACGCACGATCTGGAGATCCGCGGCGCAGGTGAACTGCTTGGC
GAAGAACAAAGCGGCTCAATGGAAACCATCGGTTTCTCGCTGTATATGGAGTTGCTGGAAAACGCCGTCGATGCGCTGAA
AGCCGGACGCGAGCCGTCGCTGGAAGATCTCACCAGCCAGCAAACAGAAGTCGACCTGCGGATGCCGTCGCTATTGCCAG
ATGATTTCATCCCTGACGTGAACACGCGTCTGTCGTTCTACAAACGTATTGCCAGCGCCAAAACGGAAAACGAACTGGAA
GAGATCAAAGTCGAGCTTATCGATCGCTTCGGCCTGCTACCGGATCCGGCGCGTACCCTGCTGGATATTGCCCGTCTGCG
CCAGCAAGCGCAGAAACTGGGGATCAGGAAGCTGGAAGGTAATGAGAAAGGCGGCGTGATCGAATTTGCCGAGAAGAATC
ACGTTAATCCGGCCTGGTTGATTGGTTTGCTGCAAAAACAGCCGCAGCATTACCGCCTTGATGGTCCGACGCGCCTGAAG
TTTATTCAGGATTTGAGTGAGCGGAAAACGCGTATCGAATGGGTACGCCAGTTTATGCGTGAACTGGAAGAGAACGCGAT
CGCTTGA

Upstream 100 bases:

>100_bases
TTTGCTAAACCATGTCGATTACGGATAATGAACAGCATTGCTTATCAGAGATATGCCCCCATATGTTGAGGCATATCCTA
ACGAGAATCTGACAACCGTT

Downstream 100 bases:

>100_bases
TGGTTAGATTAGGGGCGTTTCTGCGCCCCCATCTGCAACATTTACAAATTCTTTGCACTTCCCTGCACTATCCGACACTG
TCACCATCCATAATTCAGGC

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1148_residues
MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDS
FSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRD
PEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLENSAERFQADTLARFENRGVDPMRPLLPPQSL
WLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAIQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGE
LLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTMRNLALICESDLLGERVARRRQDSRRAINPDTLIRNLAELHIG
QPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEK
VRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMR
AAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKF
KDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVRE
AILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTA
NTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG
EEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVDLRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELE
EIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLK
FIQDLSERKTRIEWVRQFMRELEENAIA

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA