Click here to switch to the map view.

The map label for this gene is rumB

Identifier: 218557763

GI number:

Start: 899744

End: 900871

Strand: Direct

Name: rumB

Synonym: ECS88_0876

Alternate gene names: NA

Gene position: NA

Preceding gene: 218557762

Following gene: 218557769

Centisome position: NA

GC content: NA

Gene sequence:

>1128_bases
ATGCAGTGCGCACTTTACGACGCGGGTCGCTGTCGTTCCTGTCAGTGGATAACGCAGCCGATTCCAGAGCAACTCTCCGC
TAAAACCGTCGATCTTAAAAATCTGCTCGCCGATTTTCCGGTTGAGGAATGGTGTGCGCCGGTGTCAGGCCCGGAACAAG
GGTTTCGTAATAAAGCCAAAATGGTGGTGAGTGGTAGCGTTGAAAAACCACTGCTCGGTATGCTGCATCGGGATGGTACA
CCGGAAGACCTTTGTGACTGCCCGCTTTATCCAGCCTCATTTGCGCCCGTTTTTGCGGCGCTAAAACCGTTTATCGCCCG
TGCGGGTTTAACGCCTTACAACGTGGCGCGTAAACGTGGTGAACTGAAATACATTCTGCTGACTGAAAGCCAGAGCGATG
GCGGCATGATGCTGCGTTTTGTACTGCGTTCTGATACCAAACTGGCGCAACTGCGTAAGGCGCTGCCGTGGTTACAGGAA
CAATTACCGCAGCTGAAAGTTATTACCGTCAATATTCAGCCGGTACATATGGCGATTATGGAAGGGGAGACGGAGATCTA
CCTGACCGAACAACAGGCACTGGCAGAGCGTTTTAATGACGTACCGCTGTGGATCCGTCCGCAAAGTTTCTTCCAGACTA
ATCCGGCGGTCGCCAGCCAGCTGTACGCCACCGCGCGCGACTGGGTACGACAGCTGCCGGTTAAACATATGTGGGATCTG
TTCTGCGGTGTGGGTGGCTTTGGTTTACACTGCGCGACGCCTGACATGCAGTTAACCGGGATCGAAATTGCACCAGAGGC
CATTGCCTGTGCGAAGCAGTCAGCCGCTGAACTGGGCTTAACGCGTTTGCAATTTCAGGCGCTGGACTCTACGCAGTTTG
CCACCGCTCAGGGGGAAGTGCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATCGGTAAACCGCTGTGTGATTAT
CTCTCAACGATGGCACCGCGTTTTATTATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCC
TGGTTATCGCATCGAACGGGTACAGCTTTTTGATATGTTCCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGA
AGCAATAA

Upstream 100 bases:

>100_bases
CTCATCCTGATGCTGCTGTTCGTTCCCTCGACCAGTCGGCGGTTCTTCCAGTTGCAATAATGTGTATAATCGTCGCCCCT
GATGATGTGAAGGTCAATGT

Downstream 100 bases:

>100_bases
AAAAGCCGCAGGTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCATTGATTTTCTGATATGTACCGTCAGCTTTA
ATTGCTGCCAGCGCGTTATT

Product: 23S rRNA methyluridine methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>375_residues
MQCALYDAGRCRSCQWITQPIPEQLSAKTVDLKNLLADFPVEEWCAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGT
PEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLQE
QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDY
LSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMFPHTAHYEVLTLLVKQ

Sequences:
NA

Specific function: NA

COG id: COG2265

COG function: function code J; SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA