Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

Click here to switch to the map view.

The map label for this gene is clcA

Identifier: 218557098

GI number:

Start: 180927

End: 182348

Strand: Direct

Name: clcA

Synonym: ECS88_0166

Alternate gene names: NA

Gene position: NA

Preceding gene: 218557096

Following gene: 218557099

Centisome position: NA

GC content: NA

Gene sequence:

>1422_bases
ATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGCGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGA
GCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCTGTCGTCGGCACGCTTGTCGGGCTGGCTGCGGTTGCTTTTG
ACAAAGGTGTCGCCTGGTTGCAGAACCAACGTATGGGGGCACTGGTACATACTGCTGATAATTATCCGCTTCTGTTAACC
GTCGCTTTTCTCTGTTCGGCGGTGCTGGCGATGTTCGGCTACTTTTTGGTGCGCAAATACGCGCCGGAAGCAGGTGGTTC
GGGGATCCCGGAAATTGAAGGGGCGCTGGAAGATCAACGTCCCGTTCGCTGGTGGCGTGTGTTGCCGGTGAAATTCTTTG
GCGGGCTGGGAACACTCGGCGGAGGCATGGTGTTGGGGCGCGAAGGGCCAACCGTGCAGATAGGCGGCAATATCGGGCGG
ATGGTACTCGATGTTTTCCGCCTGAAAGGTGACGAAGCTCGTCATACGCTGTTGGCAACCGGTGCTGCTGCGGGGCTGGC
TGCGGCCTTTAACGCGCCGCTGGCGGGTATTTTGTTTATTATCGAAGAGATGCGTCCGCAGTTTCGCTATACGTTAATTT
CGATTAAAGCGGTATTTATTGGCGTCATTATGTCGACCATTATGTACCGGATTTTTAATCATGAAGTTGCGTTGATTGAC
GTCGGTAAACTTTCTGATGCGCCGCTTAATACGCTGTGGCTTTATCTGATCCTCGGTATTATTTTTGGCATTTTCGGCCC
TATTTTTAATAAATGGGTGCTGGGGATGCAGGATTTGCTGCACCGTGTGCACGGTGGCAATATTACCAAATGGGTACTGA
TGGGCGGTGCGATTGGCGGTCTGTGTGGATTGCTGGGGTTTGTGGCACCAGCAACTTCGGGCGGCGGTTTTAACCTGATT
CCTATCGCTACCGCGGGGAATTTCAGCATGGGAATGCTGGTGTTTATCTTCGTCGCGCGGGTCATTACCACTTTACTCTG
CTTCTCTTCCGGCGCGCCGGGCGGTATTTTTGCCCCGATGCTGGCGCTGGGTACTGTGCTGGGAACCGCTTTCGGAATGG
TTGCCGTTGAGTTGTTTCCGCAATATCACCTTGAGGCGGGGACGTTTGCTATTGCCGGAATGGGGGCGTTACTGGCGGCA
TCTATTCGCGCGCCGTTAACGGGGATCATTCTGGTTCTGGAAATGACCGATAACTACCAGCTCATTTTGCCAATGATTAT
TACCGGTCTTGGCGCAACACTATTAGCACAATTTACCGGTGGGAAACCGCTATACTCGGCGATTCTTGCGCGCACGCTGG
CAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCCGCGAGAATACTTGA

Upstream 100 bases:

>100_bases
GTTTTGTGCATTTGAAACATTACGCTTTGCAAAGGATTTTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTAT
GACCAATAAGTGATCATTGG

Downstream 100 bases:

>100_bases
ACGAAATACCAGGGTATTAGATAATGGCGATTATTATTGGGTTAGAATTTGCCCAATTGCCGATGTCGTTTGGAGCAAAA
TATGAGTGATGACGTAGCAC

Product: chloride channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>473_residues
MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLT
VAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
MVLDVFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALID
VGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLI
PIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAA
SIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQLARSKAASARENT

Sequences:
NA

Specific function: NA

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA