| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is ytjC [H]
Identifier: 218551699
GI number: 218551699
Start: 4580715
End: 4581362
Strand: Direct
Name: ytjC [H]
Synonym: EFER_4494
Alternate gene names: 218551699
Gene position: 4580715-4581362 (Clockwise)
Preceding gene: 218551697
Following gene: 218551701
Centisome position: 99.83
GC content: 54.78
Gene sequence:
>648_bases ATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCC GCTGACTGCCAAAGGTGAGCAACAGGCGATGCAGGTGGCGACCCGTGCCAAAGAGCTTGGCATTACGCATATCATCAGTA GCGATTTAGGGCGCACCCGCCGCACGGCGGAAATCATCGCCCAGGCCTGCGGCTGCGATATTCTCCTTGATCCTCGTCTG CGTGAATTAAATATGGGTGTACTGGAAACAAGAAATATCGATTCACTCACCGAAGAAGAAGAAAACTGGCGTCGCCAGCT GGTCAATGGCACCAAGGATGGCCGGATCCCACAAGGGGAATCAATGCTGGAATTAAGTGAGCGTATGCATTCCGCACTGG CGTCTTGCCTGGAGCTGCCGCAGGGAAGCCGACCTTTACTGGTGAGTCATGGTATCGCGTTGGGATGTCTGGTGAGTACC ATTCTGGGTTTACCTGCATGGGCAGAGCGTCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGACTATCAGGAAAG CCAGTGGCTGGCGTCAGGTTGGGTAGTAGAAACCGCAGGGGACGTCTCACATCTGGATGCCCCTGCGTTAGATGAGTTAC AGCGTTAA
Upstream 100 bases:
>100_bases TGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACA GCAGTATACGGAAAAAAAGC
Downstream 100 bases:
>100_bases CGACGGACAGGAATCAGCAATTCGCAGCGTAGATTCATCGGGCGATCCCCCGCTTTGGCATCTTCTGCCGGGTAGTATCG CTCAATATCCTGACCTTTAC
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTRRTAEIIAQACGCDILLDPRL RELNMGVLETRNIDSLTEEEENWRRQLVNGTKDGRIPQGESMLELSERMHSALASCLELPQGSRPLLVSHGIALGCLVST ILGLPAWAERRLRLRNCSISRVDYQESQWLASGWVVETAGDVSHLDAPALDELQR
Sequences:
>Translated_215_residues MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTRRTAEIIAQACGCDILLDPRL RELNMGVLETRNIDSLTEEEENWRRQLVNGTKDGRIPQGESMLELSERMHSALASCLELPQGSRPLLVSHGIALGCLVST ILGLPAWAERRLRLRNCSISRVDYQESQWLASGWVVETAGDVSHLDAPALDELQR >Mature_215_residues MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTRRTAEIIAQACGCDILLDPRL RELNMGVLETRNIDSLTEEEENWRRQLVNGTKDGRIPQGESMLELSERMHSALASCLELPQGSRPLLVSHGIALGCLVST ILGLPAWAERRLRLRNCSISRVDYQESQWLASGWVVETAGDVSHLDAPALDELQR
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=215, Percent_Identity=92.093023255814, Blast_Score=401, Evalue=1e-113, Organism=Escherichia coli, GI1786857, Length=186, Percent_Identity=26.8817204301075, Blast_Score=78, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24004; Mature: 24004
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTR CEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH RTAEIIAQACGCDILLDPRLRELNMGVLETRNIDSLTEEEENWRRQLVNGTKDGRIPQGE HHHHHHHHHHCCCEEECCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH SMLELSERMHSALASCLELPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSIS HHHHHHHHHHHHHHHHHHCCCCCCCEEHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC RVDYQESQWLASGWVVETAGDVSHLDAPALDELQR CCCCHHHHHHHCCEEEECCCCHHHCCCCCHHHHCC >Mature Secondary Structure MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTR CEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH RTAEIIAQACGCDILLDPRLRELNMGVLETRNIDSLTEEEENWRRQLVNGTKDGRIPQGE HHHHHHHHHHCCCEEECCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH SMLELSERMHSALASCLELPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSIS HHHHHHHHHHHHHHHHHHCCCCCCCEEHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC RVDYQESQWLASGWVVETAGDVSHLDAPALDELQR CCCCHHHHHHHCCEEEECCCCHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA