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The map label for this gene is ydfR [H]

Identifier: 218551645

GI number: 218551645

Start: 4527543

End: 4528115

Strand: Direct

Name: ydfR [H]

Synonym: EFER_4438

Alternate gene names: 218551645

Gene position: 4527543-4528115 (Clockwise)

Preceding gene: 218551644

Following gene: 218551646

Centisome position: 98.67

GC content: 46.42

Gene sequence:

>573_bases
TTGCGAGAAGAGAGTAATCCAATGACACAAGACTATGAACTGGTTGTGAAAGGAGTCCGCAATTTTGAGAATAAAGTGGC
GGTAACTGTAGCCTTACGGGACAAAAAACGCTTTGACGGTGAAATTTTTGACCTGGACATCTCGCTGGACCGTGTTGAAG
GTGCCGCGCTGGAGTTTTATGAGGCAGCAGCCAGAATGAGAATCAGACAGGTATTCCTGGATGTTGCTGCCGGGTTATGT
GTAGGGGATGAGCAGTCGCCGGAAAAGCGCCCCATAATTTTAGAGGCGCAGAATGTGTGGATAACCTACAAAGGAAAGCT
ACCGGGAAGAATTACTGGTTCTCTGAAGACGCCGCCGACGGCATTGCGGTCAGAAAAAGATGATATTGAATCGCCCATTG
AAAAACTGGAGGGCAGCGTCGCTGATCTGAATAAAAAATTGTCGGTGCTGATCCCTTCTGAAGATGAAAAAAAACGCCGC
GATGAGCAGTTTGCGGCGTTTTACGATTATTGCATTGAAGTTACTCGCAGGAGTTTTGTGAAGATTTTTGAGGAGGGTAA
ATCTCTTCAGTAA

Upstream 100 bases:

>100_bases
TCACAGTGGGCTGCAATCGGTGTGCTGGGTAGTCTGGTTTTTGGCCTGCTGACGTATCTGACAAACCTTTATTTCAAGAT
TAAAGAAGACAGGCGTAAGG

Downstream 100 bases:

>100_bases
GCTTAATGGCGGACGCTGCAATTAATTCAGGAAGGTCCGCAAGGTCATCTGTCAGTGGATATGATGAAAAATCGGCGGCA
GTTCTGTTAAGAAGCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MREESNPMTQDYELVVKGVRNFENKVAVTVALRDKKRFDGEIFDLDISLDRVEGAALEFYEAAARMRIRQVFLDVAAGLC
VGDEQSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPTALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRR
DEQFAAFYDYCIEVTRRSFVKIFEEGKSLQ

Sequences:

>Translated_190_residues
MREESNPMTQDYELVVKGVRNFENKVAVTVALRDKKRFDGEIFDLDISLDRVEGAALEFYEAAARMRIRQVFLDVAAGLC
VGDEQSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPTALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRR
DEQFAAFYDYCIEVTRRSFVKIFEEGKSLQ
>Mature_190_residues
MREESNPMTQDYELVVKGVRNFENKVAVTVALRDKKRFDGEIFDLDISLDRVEGAALEFYEAAARMRIRQVFLDVAAGLC
VGDEQSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPTALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRR
DEQFAAFYDYCIEVTRRSFVKIFEEGKSLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787837, Length=73, Percent_Identity=82.1917808219178, Blast_Score=126, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009759 [H]

Pfam domain/function: PF07041 DUF1327 [H]

EC number: NA

Molecular weight: Translated: 21664; Mature: 21664

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREESNPMTQDYELVVKGVRNFENKVAVTVALRDKKRFDGEIFDLDISLDRVEGAALEFY
CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCHHHHHH
EAAARMRIRQVFLDVAAGLCVGDEQSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPT
HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCEEEEECEEEEEEECCCCCEEECCCCCCCH
ALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRRDEQFAAFYDYCIEVTRRSFV
HHCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIFEEGKSLQ
HHHHCCCCCC
>Mature Secondary Structure
MREESNPMTQDYELVVKGVRNFENKVAVTVALRDKKRFDGEIFDLDISLDRVEGAALEFY
CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCHHHHHH
EAAARMRIRQVFLDVAAGLCVGDEQSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPT
HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCEEEEECEEEEEEECCCCCEEECCCCCCCH
ALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRRDEQFAAFYDYCIEVTRRSFV
HHCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIFEEGKSLQ
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]