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The map label for this gene is ytfT [H]

Identifier: 218551524

GI number: 218551524

Start: 4420009

End: 4421031

Strand: Direct

Name: ytfT [H]

Synonym: EFER_4308

Alternate gene names: 218551524

Gene position: 4420009-4421031 (Clockwise)

Preceding gene: 218551523

Following gene: 218551525

Centisome position: 96.32

GC content: 56.4

Gene sequence:

>1023_bases
ATGCCTCAATCTCTCCCGGACACTACGCCGCCGAAAAGGCGCTTTCGCTGGCCAACGGGAATGCCGCAGCTGGCGGCGCT
ATTGCTGGTGCTGCTGGTCGATAGCCTGGTGGCCCCGCATTTCTGGCAGGTGGTGCTTCAGGATGGGCGTTTGTTCGGTA
GCCCTATCGACATTCTTAATCGCGCCGCCCCCGTTGCGCTACTGGCGATTGGTATGACGCTGGTGATCGCCACTGGTGGG
ATTGATCTCTCCGTGGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGATGACGGTCGCGGGATTCAGCCTGCC
AATTGTTTTGTTAAGCGCCCTGGGCACTGGCATCCTGGCGGGATTGTGGAACGGCATACTGGTGGCGATCCTCAAAATTC
AGCCGTTTGTTGCCACTTTGATCCTAATGGTCGCCGGACGAGGTGTGGCGCAATTGATCACCTCCGGGCAGATCGTCACG
TTCAACTCGCCGGATCTCTCATGGTTTGGCAGTGGATCGCTGTTGTTCCTGCCAACGCCAGTCATTATTGCGGTGCTGAC
GCTTCTTCTGTTCTGGCTGTTGACCCGCAAAACGGCACTGGGGATGTTTATCGAAGCTGTTGGTATCAACATTCGGGCGG
CAAAAAATGCCGGAGTCAACACGCGGATCATCGTCATGCTCACCTACGTGTTGAGTGGGCTATGTGCGGCGATTGCGGGC
ATAATCGTGGCGGCTGATATTCGCGGTGCCGATGCCAATAACGCCGGGTTATGGCTGGAACTGGACGCCATTCTTGCGGT
GGTGATTGGCGGTGGATCGCTGATGGGCGGGCGCTTTAACCTGCTGCTCTCAGTAGTGGGTGCGCTGATTATTCAGGGAA
TGAATACCGGGATCTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAAGCAGTGGTGGTGCTTTGCGTGCTG
ATTGTTCAGTCGCAACGCTTTATAAGTCTGATTAAAGGAGTGCGTAGACGTGATAAAACGTAA

Upstream 100 bases:

>100_bases
ATTATCATGCGCGATCGCAAACAGGTGGCGGAGATCCCGCTGGCAGAGCTTTCCGTTCCGGCGATCATGAACGCCATTGC
GGCGTAAGGAGAACAGTGTG

Downstream 100 bases:

>100_bases
CCTGCCGCTTATGATCACCATCGGCGTCTTTGTGCTGGGCTATCTCTACTGCCTGACGCAGTTCCCCGGTTTTGCTTCCA
CAAGAGTGATCTGCAATATC

Product: sugar ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGG
IDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
FNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVL
IVQSQRFISLIKGVRRRDKT

Sequences:

>Translated_340_residues
MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGG
IDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
FNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVL
IVQSQRFISLIKGVRRRDKT
>Mature_339_residues
PQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGI
DLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTF
NSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAGI
IVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLI
VQSQRFISLIKGVRRRDKT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=340, Percent_Identity=98.5294117647059, Blast_Score=644, Evalue=0.0,
Organism=Escherichia coli, GI1790191, Length=326, Percent_Identity=37.1165644171779, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI1788896, Length=309, Percent_Identity=33.9805825242718, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1790524, Length=244, Percent_Identity=32.7868852459016, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI145693152, Length=263, Percent_Identity=36.1216730038023, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787793, Length=276, Percent_Identity=35.8695652173913, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789992, Length=330, Percent_Identity=30.3030303030303, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI87082395, Length=252, Percent_Identity=35.7142857142857, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1787794, Length=274, Percent_Identity=27.7372262773723, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788471, Length=281, Percent_Identity=29.8932384341637, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35581; Mature: 35450

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILN
CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILA
HHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTFNSPDLSWFGSGSLLFLPTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECHH
VIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL
HHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
SGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRRRDKT
ECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILN
CCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILA
HHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTFNSPDLSWFGSGSLLFLPTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECHH
VIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL
HHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
SGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRRRDKT
ECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]