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The map label for this gene is ybeQ [H]

Identifier: 218551519

GI number: 218551519

Start: 4413241

End: 4414713

Strand: Direct

Name: ybeQ [H]

Synonym: EFER_4303

Alternate gene names: 218551519

Gene position: 4413241-4414713 (Clockwise)

Preceding gene: 218551518

Following gene: 218551522

Centisome position: 96.18

GC content: 46.64

Gene sequence:

>1473_bases
ATGAAAAAATCTCTTCTGGCTGCACTGCTGACAGGACTGTTTGCACTCGTTTCTCTTCCCGCTTTGGGAAATGTCAATTT
CGAGCAATTAAAGCAAAAAGCTGAACGTGGAGAAGCGAAAGCACAGCTGGAGCTGGGATATCGCTATTTTCAGGGTAATG
AAACGACAAAGGATCTCACCCAGGCGATTGACTGGTTTCGCCGTGCCGCAGAGCAGGGATACACCCCGGCAGAATTTGTA
CTGGGGTTACGCTATATGAACGGTGAAGGTGTGCCGAAAGATTATGCTCAGGCGGTTATCTGGTACAAAAAAGCAGCACT
GAAGGGGCTTCCACAGGCGCAGCAGAATTTGGGTGTAATGTACCATGACGGTAAGGGTGTGAAGATTGATAAAGCCGAAT
CTGTGAAATGGTTTCGCCTGGCAGCAGAGCAAGGTCGTGACAGCGGCCAGCAAAGTATGGGAGATGCATATTTTGAAGGC
GATGGTGTAACGCGGGATTACGTTATGGCACGTGAGTGGTATAGCAAAGCAGCGGAACAAGGTAACGTCTGGTCCTGTAA
TCAGCTTGGTTATATTTATTCCAAAGGTTTAGGTGTTGAAAAAAACGATGCTATATCGGCGCAATGGTATCGAAAATCAG
CGACATCCGGCGACGAGTTAGGGCAGCTTCATTTGGCTGATATGTACTATTTCGGTATCGGTGTTACTCAGGATTACACT
CAATCGCGGATATTGTTTACCCAGTCGGCAGAGCAGGGAAATGCTATTGCACAGTATCGACTGGGATACATATTAGAAGA
AGGTTTGGCGGGTGCGAAAGAGCCGTTAAAAGCACTGGAGTGGTACCGTAAATCGGCAGAACAGGGCAATGCCATTGGGC
AATATTATTTAGCTGAAATATATATCAGGCGCGCAGAAGGCATTCCCTATAACCGTGAGCAAGCTATCTATTGGTACACC
AAATCGGCAGAACAGGGGGATACTGATGCTCAGGTTAATCTCGGGGCATTATTGTATCGACATGGTTCCGAAGAAGAACA
GAGAAGGGCCGTGGACTGGTATCGCAAGGCGGCTGAAGAGGGAGTGGCAATGGCGCAATTTAATTTGGGTAATGCTTTAC
TCCAGGGAAAAGGTGTTAAAAAAGATGAGCAACAAGCCGCAATCTGGATGCGAAAAGCCGCAGAGCAAGGATTTAGTTCA
GCGCAGGTGCAATTAGGTGAAATCTATTATTATGGCTTGGGCGTAGAACGTGATTATGTGCAGGCCTGGGCGTGGTTCGA
TACCGCATCGACCAATGATATGAATCTTTTTGGTACGGAAAACCGCAATATTACAGAGAAAAAGCTGACAGCCAAACAAC
TGCAACAGGCTGAATTATTATCGCAACAATATATAGAAAAATATGCCCCGGAAGCCTGGGCGAGAATGCAAAAGCTTAAC
GCACGATCTACTGTAACGACGGGTAATAAATAA

Upstream 100 bases:

>100_bases
AATGTATTCCGAATTTGACGCCATTCTTATCTTTTCTTAAATGCTGATTTGTTGTGCAGTGTTATAAACACCTGGCACGC
TCAACAAGGACGCGACCTCA

Downstream 100 bases:

>100_bases
CGGGTAACTGTCAGATCAGGTTTGCGCTAATACCACTCAACCAATGCCACCTGCGGGTGTAATGCCAGTCAGTTAAGCAA
CTGACTGGCTCTTTTTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MKKSLLAALLTGLFALVSLPALGNVNFEQLKQKAERGEAKAQLELGYRYFQGNETTKDLTQAIDWFRRAAEQGYTPAEFV
LGLRYMNGEGVPKDYAQAVIWYKKAALKGLPQAQQNLGVMYHDGKGVKIDKAESVKWFRLAAEQGRDSGQQSMGDAYFEG
DGVTRDYVMAREWYSKAAEQGNVWSCNQLGYIYSKGLGVEKNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYT
QSRILFTQSAEQGNAIAQYRLGYILEEGLAGAKEPLKALEWYRKSAEQGNAIGQYYLAEIYIRRAEGIPYNREQAIYWYT
KSAEQGDTDAQVNLGALLYRHGSEEEQRRAVDWYRKAAEEGVAMAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGFSS
AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLTAKQLQQAELLSQQYIEKYAPEAWARMQKLN
ARSTVTTGNK

Sequences:

>Translated_490_residues
MKKSLLAALLTGLFALVSLPALGNVNFEQLKQKAERGEAKAQLELGYRYFQGNETTKDLTQAIDWFRRAAEQGYTPAEFV
LGLRYMNGEGVPKDYAQAVIWYKKAALKGLPQAQQNLGVMYHDGKGVKIDKAESVKWFRLAAEQGRDSGQQSMGDAYFEG
DGVTRDYVMAREWYSKAAEQGNVWSCNQLGYIYSKGLGVEKNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYT
QSRILFTQSAEQGNAIAQYRLGYILEEGLAGAKEPLKALEWYRKSAEQGNAIGQYYLAEIYIRRAEGIPYNREQAIYWYT
KSAEQGDTDAQVNLGALLYRHGSEEEQRRAVDWYRKAAEEGVAMAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGFSS
AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLTAKQLQQAELLSQQYIEKYAPEAWARMQKLN
ARSTVTTGNK
>Mature_490_residues
MKKSLLAALLTGLFALVSLPALGNVNFEQLKQKAERGEAKAQLELGYRYFQGNETTKDLTQAIDWFRRAAEQGYTPAEFV
LGLRYMNGEGVPKDYAQAVIWYKKAALKGLPQAQQNLGVMYHDGKGVKIDKAESVKWFRLAAEQGRDSGQQSMGDAYFEG
DGVTRDYVMAREWYSKAAEQGNVWSCNQLGYIYSKGLGVEKNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYT
QSRILFTQSAEQGNAIAQYRLGYILEEGLAGAKEPLKALEWYRKSAEQGNAIGQYYLAEIYIRRAEGIPYNREQAIYWYT
KSAEQGDTDAQVNLGALLYRHGSEEEQRRAVDWYRKAAEEGVAMAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGFSS
AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLTAKQLQQAELLSQQYIEKYAPEAWARMQKLN
ARSTVTTGNK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=326, Percent_Identity=29.4478527607362, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI151301150, Length=453, Percent_Identity=25.60706401766, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI217330658, Length=187, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI217330656, Length=187, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI154689719, Length=326, Percent_Identity=27.3006134969325, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081769, Length=315, Percent_Identity=34.6031746031746, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1786867, Length=119, Percent_Identity=36.1344537815126, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=433, Percent_Identity=26.7898383371824, Blast_Score=116, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6319410, Length=344, Percent_Identity=25, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355295, Length=410, Percent_Identity=30, Blast_Score=144, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 55288; Mature: 55288

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLAALLTGLFALVSLPALGNVNFEQLKQKAERGEAKAQLELGYRYFQGNETTKDLT
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEHEECEEEECCCCHHHHHH
QAIDWFRRAAEQGYTPAEFVLGLRYMNGEGVPKDYAQAVIWYKKAALKGLPQAQQNLGVM
HHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEE
YHDGKGVKIDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ
EECCCCCEECCCCCCHHHHHHHHHCCCCCHHHCCCCEECCCCCCHHHHHHHHHHHHHHCC
GNVWSCNQLGYIYSKGLGVEKNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYT
CCCEEECCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCCEEEEEEEEEECCCCCCCC
QSRILFTQSAEQGNAIAQYRLGYILEEGLAGAKEPLKALEWYRKSAEQGNAIGQYYLAEI
CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YIRRAEGIPYNREQAIYWYTKSAEQGDTDAQVNLGALLYRHGSEEEQRRAVDWYRKAAEE
HHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHEECCCCCHHHHHHHHHHHHHHHC
GVAMAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGFSSAQVQLGEIYYYGLGVERDYV
CCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHH
QAWAWFDTASTNDMNLFGTENRNITEKKLTAKQLQQAELLSQQYIEKYAPEAWARMQKLN
HHHHEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
ARSTVTTGNK
CCCCCCCCCC
>Mature Secondary Structure
MKKSLLAALLTGLFALVSLPALGNVNFEQLKQKAERGEAKAQLELGYRYFQGNETTKDLT
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEHEECEEEECCCCHHHHHH
QAIDWFRRAAEQGYTPAEFVLGLRYMNGEGVPKDYAQAVIWYKKAALKGLPQAQQNLGVM
HHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEE
YHDGKGVKIDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ
EECCCCCEECCCCCCHHHHHHHHHCCCCCHHHCCCCEECCCCCCHHHHHHHHHHHHHHCC
GNVWSCNQLGYIYSKGLGVEKNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYT
CCCEEECCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCCEEEEEEEEEECCCCCCCC
QSRILFTQSAEQGNAIAQYRLGYILEEGLAGAKEPLKALEWYRKSAEQGNAIGQYYLAEI
CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YIRRAEGIPYNREQAIYWYTKSAEQGDTDAQVNLGALLYRHGSEEEQRRAVDWYRKAAEE
HHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHEECCCCCHHHHHHHHHHHHHHHC
GVAMAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGFSSAQVQLGEIYYYGLGVERDYV
CCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHH
QAWAWFDTASTNDMNLFGTENRNITEKKLTAKQLQQAELLSQQYIEKYAPEAWARMQKLN
HHHHEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
ARSTVTTGNK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]