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The map label for this gene is yjcP [H]

Identifier: 218551508

GI number: 218551508

Start: 4395594

End: 4397051

Strand: Direct

Name: yjcP [H]

Synonym: EFER_4291

Alternate gene names: 218551508

Gene position: 4395594-4397051 (Clockwise)

Preceding gene: 218551507

Following gene: 218551509

Centisome position: 95.79

GC content: 52.88

Gene sequence:

>1458_bases
ATGAGCCGTCATCTTTCCCGCTTAATTCTCTGTGGTCTGTTAGGCGGCGCGACGCTGCTTTCTGGCTGTGCCCTGGTACG
CAAAGATTCTGCGCCGCATCAGCAGTTAGCCCCCGAGCAGATTAAACTTGCCGATGACATTCACCTGGCAAGCGCCGGTT
GGCCACAAGCGCAGTGGTGGCGACAATTTAACGATCCGCAGCTTAACGCCCTTATCGAGCGTACTTTGCAGGGATCGCAC
ACGCTTGCAGAAGCCAAATTACGCGTTGAGAAGGCGCAATCGCAGGCGGATTTACTGGAAGCTGGTTCACAATTGCAAGT
TGCTGCGCTGGGAATGTTGAATCGCCAGCGTGTCTCGGCGAATGGTTTTTTAAGCCCCTATGCGATGGATGCACCGCATC
TTGGTATGGACGGGCCGTATTATACCGAAGCCACCGTTGGCGTATTTGCCGGGATGGATCTGGATCTGTGGGGCGCTCAC
CGTTCATCGGTCGAGGCCGCCATTGGCGCACAAAATGCCGCGCTGGCCGAGTCTTCGGCGGTGGAGTTATCACTTACCAC
GGGTGTGGCACAGCTTTACTACAGTATGCAGGCCAGCTACCAGATGTTGGATTTGCTGGAGAAAACACGCGATGTGATTG
ATTACGCAGTAAAAGCGCACCAAAGCAAAGTCGCCAGTGGTCTGGAAGCTAAAGTGCCTTACCACGGCGCAAGGGCGCAA
ATCCTCGCGGTAGAAAAACAAATCGCGGCAGTAAAAGGGCAACTCCGTGAAACACGTGAATCCCTGCGTGCGTTGATGGG
GGCTGGTGCCAGCGATTTGCCAGAGATCAAACCTGTTGCGCTTCCTTTGGTAAATACCGGTATTCCGTCATCACTTTCTT
ACGAACTACTCGCCCGGCGCCCGGATCTGCAAGCGATGCGCTGGTACGTTCAGGCATCTTTAAATCAGGTGGACGCCGCG
CGGGCGTTGTTCTATCCAAGCTTTGATATCAAAGCATTCTTCGGGCTGGATGCTATTCATCTCGACAGCTTATTCAAAAA
CACCAGCAGGCAGTTTAACGTCATTCCTGGTCTGAAATTACCGTTGTTTGATGGTGGGCGACTGAATGCCAACCTCGAAG
GAACGCGGGCGACCAGTAATATGATGATTGAACGCTATAACCAGTCGGTACTCAATGCCGTTCGTGATGTGGCGATAAAC
GGTACGCGTCTACAAACGCTGAATAATCAGCGAGAAATACAAGCTGAGCGCGTAGAAGCCATCCGTTATACCCAGAAGGC
TGCAACAGCGGCCTGGAAGCAAGGGCTAAGCAGCCGTTTGCAGGCAACGGAATCGCAGCTTCCGGTGTTAGCTGAAGAGA
TGTCATTGCTGATGCTGGATTCACAACGTGTTGTGCAAAGTATCCAACTGATCAAGTCGCTTGGTGGTGGCTATCAGGCA
ATACCTGCCAGTAAGTAA

Upstream 100 bases:

>100_bases
AACAGGAGCAGCGCGTCATGCAGTTAATCGCCAGTCTACCTGACTGGACTTCCCCAACGCTTACGCCTGCCACGCAACAC
GTGCAAGGAGCTACACCATC

Downstream 100 bases:

>100_bases
TTCTCACACCGCGCGGTGAATGTCGCGCGGTATCTCACTTCGTCACGTCAAAACTGACGACAGCCTGTTTTTCGTCAGGG
TTTTGACCACAATTCACCCG

Product: outer membrane efflux protein MdtP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSRHLSRLILCGLLGGATLLSGCALVRKDSAPHQQLAPEQIKLADDIHLASAGWPQAQWWRQFNDPQLNALIERTLQGSH
TLAEAKLRVEKAQSQADLLEAGSQLQVAALGMLNRQRVSANGFLSPYAMDAPHLGMDGPYYTEATVGVFAGMDLDLWGAH
RSSVEAAIGAQNAALAESSAVELSLTTGVAQLYYSMQASYQMLDLLEKTRDVIDYAVKAHQSKVASGLEAKVPYHGARAQ
ILAVEKQIAAVKGQLRETRESLRALMGAGASDLPEIKPVALPLVNTGIPSSLSYELLARRPDLQAMRWYVQASLNQVDAA
RALFYPSFDIKAFFGLDAIHLDSLFKNTSRQFNVIPGLKLPLFDGGRLNANLEGTRATSNMMIERYNQSVLNAVRDVAIN
GTRLQTLNNQREIQAERVEAIRYTQKAATAAWKQGLSSRLQATESQLPVLAEEMSLLMLDSQRVVQSIQLIKSLGGGYQA
IPASK

Sequences:

>Translated_485_residues
MSRHLSRLILCGLLGGATLLSGCALVRKDSAPHQQLAPEQIKLADDIHLASAGWPQAQWWRQFNDPQLNALIERTLQGSH
TLAEAKLRVEKAQSQADLLEAGSQLQVAALGMLNRQRVSANGFLSPYAMDAPHLGMDGPYYTEATVGVFAGMDLDLWGAH
RSSVEAAIGAQNAALAESSAVELSLTTGVAQLYYSMQASYQMLDLLEKTRDVIDYAVKAHQSKVASGLEAKVPYHGARAQ
ILAVEKQIAAVKGQLRETRESLRALMGAGASDLPEIKPVALPLVNTGIPSSLSYELLARRPDLQAMRWYVQASLNQVDAA
RALFYPSFDIKAFFGLDAIHLDSLFKNTSRQFNVIPGLKLPLFDGGRLNANLEGTRATSNMMIERYNQSVLNAVRDVAIN
GTRLQTLNNQREIQAERVEAIRYTQKAATAAWKQGLSSRLQATESQLPVLAEEMSLLMLDSQRVVQSIQLIKSLGGGYQA
IPASK
>Mature_484_residues
SRHLSRLILCGLLGGATLLSGCALVRKDSAPHQQLAPEQIKLADDIHLASAGWPQAQWWRQFNDPQLNALIERTLQGSHT
LAEAKLRVEKAQSQADLLEAGSQLQVAALGMLNRQRVSANGFLSPYAMDAPHLGMDGPYYTEATVGVFAGMDLDLWGAHR
SSVEAAIGAQNAALAESSAVELSLTTGVAQLYYSMQASYQMLDLLEKTRDVIDYAVKAHQSKVASGLEAKVPYHGARAQI
LAVEKQIAAVKGQLRETRESLRALMGAGASDLPEIKPVALPLVNTGIPSSLSYELLARRPDLQAMRWYVQASLNQVDAAR
ALFYPSFDIKAFFGLDAIHLDSLFKNTSRQFNVIPGLKLPLFDGGRLNANLEGTRATSNMMIERYNQSVLNAVRDVAING
TRLQTLNNQREIQAERVEAIRYTQKAATAAWKQGLSSRLQATESQLPVLAEEMSLLMLDSQRVVQSIQLIKSLGGGYQAI
PASK

Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI2367348, Length=482, Percent_Identity=85.2697095435685, Blast_Score=843, Evalue=0.0,
Organism=Escherichia coli, GI1786785, Length=471, Percent_Identity=27.8131634819533, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52873; Mature: 52742

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHLSRLILCGLLGGATLLSGCALVRKDSAPHQQLAPEQIKLADDIHLASAGWPQAQWW
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCEEECCCCCCHHHHH
RQFNDPQLNALIERTLQGSHTLAEAKLRVEKAQSQADLLEAGSQLQVAALGMLNRQRVSA
HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCC
NGFLSPYAMDAPHLGMDGPYYTEATVGVFAGMDLDLWGAHRSSVEAAIGAQNAALAESSA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCHHHHHHHHCCCCHHHCCCCC
VELSLTTGVAQLYYSMQASYQMLDLLEKTRDVIDYAVKAHQSKVASGLEAKVPYHGARAQ
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
ILAVEKQIAAVKGQLRETRESLRALMGAGASDLPEIKPVALPLVNTGIPSSLSYELLARR
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCC
PDLQAMRWYVQASLNQVDAARALFYPSFDIKAFFGLDAIHLDSLFKNTSRQFNVIPGLKL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCEEECCCCCC
PLFDGGRLNANLEGTRATSNMMIERYNQSVLNAVRDVAINGTRLQTLNNQREIQAERVEA
CCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
IRYTQKAATAAWKQGLSSRLQATESQLPVLAEEMSLLMLDSQRVVQSIQLIKSLGGGYQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
IPASK
CCCCC
>Mature Secondary Structure 
SRHLSRLILCGLLGGATLLSGCALVRKDSAPHQQLAPEQIKLADDIHLASAGWPQAQWW
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCEEECCCCCCHHHHH
RQFNDPQLNALIERTLQGSHTLAEAKLRVEKAQSQADLLEAGSQLQVAALGMLNRQRVSA
HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCC
NGFLSPYAMDAPHLGMDGPYYTEATVGVFAGMDLDLWGAHRSSVEAAIGAQNAALAESSA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCHHHHHHHHCCCCHHHCCCCC
VELSLTTGVAQLYYSMQASYQMLDLLEKTRDVIDYAVKAHQSKVASGLEAKVPYHGARAQ
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
ILAVEKQIAAVKGQLRETRESLRALMGAGASDLPEIKPVALPLVNTGIPSSLSYELLARR
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCC
PDLQAMRWYVQASLNQVDAARALFYPSFDIKAFFGLDAIHLDSLFKNTSRQFNVIPGLKL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCEEECCCCCC
PLFDGGRLNANLEGTRATSNMMIERYNQSVLNAVRDVAINGTRLQTLNNQREIQAERVEA
CCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
IRYTQKAATAAWKQGLSSRLQATESQLPVLAEEMSLLMLDSQRVVQSIQLIKSLGGGYQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
IPASK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]