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The map label for this gene is ytfA [H]

Identifier: 218551482

GI number: 218551482

Start: 4369223

End: 4369948

Strand: Direct

Name: ytfA [H]

Synonym: EFER_4265

Alternate gene names: 218551482

Gene position: 4369223-4369948 (Clockwise)

Preceding gene: 218551473

Following gene: 218551484

Centisome position: 95.22

GC content: 40.5

Gene sequence:

>726_bases
ATGAAATTACGACTTTTATCCTTTTTGCTGTCGCTGAGATCAAATCCGGTTATGATAGCCATCACGAAGAGGAAGTGGGG
AAGTGGAATGTATCTTGATACCAGTCACGCACAAAACCTGAAGGAAAAATTGCTGCTATGCGCGGTTAATGAATTTGCCG
AATATGGTTATGAAGGGGCCAGAGTAGATAATATTGTAAAGGCAGCAGGGTGCAGTAAACAGACGGTTTATCACCACTTT
GGTAATAAAGAAAATTTGTTTATTGAAGTACTGGAGTATACTTGGAACGATATTCGCGAAAAAGAGAGAGAGCTTGACAT
TTCAGGGCTGTCTCCGATTGTTGCGATCGAGAAAATAATTGATTTTACTTGGGATTATTACATCAATAACCCGTGGTTTT
TAAAAATAGTCCATAGTGAAAACCAAAGTAAGGGCGTGCATTATAAAAAATCAAAACGCCTTGCTGAAATTAACCATGCA
CATTTGCAGTCAATGGCTTCATTATTAGAAGAGGGGCAGCGGCAGAAAACCTTTAAGAAAGATATTGATCCCTTACAAAT
CAATATTAATATCGCCGCACTGGGTGCATATTATTTAATAAACCAGTACACACTGGGGATGGTATATCACATTAGCATGG
TTTCACCTGAGGCTTTGGAAGCCAGACGCAGGGTGATCAAAGAGACCATCCTGAGCTGGCTTTTGGTGAACCCGGCACGT
GGGTAA

Upstream 100 bases:

>100_bases
TGTTTCCTTAAGTGATGATTAGCTTGCGACTGGCAGGTAAAAATATCAACCATCTAGTTGGTTGATCTGCGAGAGCGATC
ACAGGTAATTTGATAACTCA

Downstream 100 bases:

>100_bases
TCAGCGCGCGCGGATGAAATTACCATCAGGTTGGCGGGTGAACAGGACTTGCTGATTATTTCCTGTATCAATGGTTAAGC
CGGTAACCACCCCATTCGCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKLRLLSFLLSLRSNPVMIAITKRKWGSGMYLDTSHAQNLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHF
GNKENLFIEVLEYTWNDIREKERELDISGLSPIVAIEKIIDFTWDYYINNPWFLKIVHSENQSKGVHYKKSKRLAEINHA
HLQSMASLLEEGQRQKTFKKDIDPLQININIAALGAYYLINQYTLGMVYHISMVSPEALEARRRVIKETILSWLLVNPAR
G

Sequences:

>Translated_241_residues
MKLRLLSFLLSLRSNPVMIAITKRKWGSGMYLDTSHAQNLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHF
GNKENLFIEVLEYTWNDIREKERELDISGLSPIVAIEKIIDFTWDYYINNPWFLKIVHSENQSKGVHYKKSKRLAEINHA
HLQSMASLLEEGQRQKTFKKDIDPLQININIAALGAYYLINQYTLGMVYHISMVSPEALEARRRVIKETILSWLLVNPAR
G
>Mature_241_residues
MKLRLLSFLLSLRSNPVMIAITKRKWGSGMYLDTSHAQNLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHF
GNKENLFIEVLEYTWNDIREKERELDISGLSPIVAIEKIIDFTWDYYINNPWFLKIVHSENQSKGVHYKKSKRLAEINHA
HLQSMASLLEEGQRQKTFKKDIDPLQININIAALGAYYLINQYTLGMVYHISMVSPEALEARRRVIKETILSWLLVNPAR
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015893
- InterPro:   IPR011075 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27831; Mature: 27831

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRLLSFLLSLRSNPVMIAITKRKWGSGMYLDTSHAQNLKEKLLLCAVNEFAEYGYEGA
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCC
RVDNIVKAAGCSKQTVYHHFGNKENLFIEVLEYTWNDIREKERELDISGLSPIVAIEKII
HHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DFTWDYYINNPWFLKIVHSENQSKGVHYKKSKRLAEINHAHLQSMASLLEEGQRQKTFKK
HHHHHEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIDPLQININIAALGAYYLINQYTLGMVYHISMVSPEALEARRRVIKETILSWLLVNPAR
CCCEEEEEEEEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
G
C
>Mature Secondary Structure
MKLRLLSFLLSLRSNPVMIAITKRKWGSGMYLDTSHAQNLKEKLLLCAVNEFAEYGYEGA
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCC
RVDNIVKAAGCSKQTVYHHFGNKENLFIEVLEYTWNDIREKERELDISGLSPIVAIEKII
HHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DFTWDYYINNPWFLKIVHSENQSKGVHYKKSKRLAEINHAHLQSMASLLEEGQRQKTFKK
HHHHHEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIDPLQININIAALGAYYLINQYTLGMVYHISMVSPEALEARRRVIKETILSWLLVNPAR
CCCEEEEEEEEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]