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The map label for this gene is ulaE [H]

Identifier: 218551467

GI number: 218551467

Start: 4356354

End: 4357208

Strand: Direct

Name: ulaE [H]

Synonym: EFER_4250

Alternate gene names: 218551467

Gene position: 4356354-4357208 (Clockwise)

Preceding gene: 218551466

Following gene: 218551468

Centisome position: 94.94

GC content: 57.43

Gene sequence:

>855_bases
ATGTTGTCCAAACAAATCCCGCTTGGCATCTACGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGGCTGCAACT
GGCAAAAACGTTAGGCTTCGATTTTGTCGAGATGTCGGTAGATGAAACGGACGATCGCCTCTCGCGCCTTGACTGGAGCC
GCGAGCAGCGTCTGGCGCTGGTGAACGCGATTGTTGAAACCGGCGTGCGCGTACCATCCATGTGCCTTTCTGCTCATCGT
CGTTTCCCGCTGGGCAGCGAAGATGACGCAGTACGGGCGCAGGGGCTGGAGATTATGCGCAAAGCTATCCAGTTCGCCCA
GGATGTCGGTATTCGCGTGATCCAACTGGCGGGCTACGACGTTTACTATCAGGAAGCCAATAACGAAACGCGTCGTCGTT
TCCGTGACGGCCTGAAAGAGAGCGTTGAGATGGCGAGCCGCGCGCAGGTGACGCTGGCAATGGAGATCATGGATTACCCG
TTGATGAACTCCATCAGCAAGGCACTGGGTTACGCGCACTATCTCAACAACCCGTGGTTCCAGCTCTACCCGGACATCGG
CAACTTGTCGGCGTGGGACAACGACGTGCAGATGGAGTTGCAGGCCGGGATCGGGCATATCGTCGCGGTGCATGTGAAAG
ACACTAAACCAGGCGTCTTCAAAAACGTGCCGTTTGGCGAGGGTGTGGTGGATTTCGAACGTTGCTTTGAAACGCTCAAA
CAGAGTGGCTATTGCGGGCCGTACCTGATTGAGATGTGGAGCGAAACGGCGGAAGACCCGGCGGCAGAAGTGGCGAAAGC
GCGTGATTGGGTGAAAGCGCGCATGGCCAAAGCCGGCATGGTGGAGGCGGCATAA

Upstream 100 bases:

>100_bases
GTTTATCGCTGGGCGTAGTATCCGTGATGCCGCCTCTCCGGTTGAAGCCGCGCGTCAGTTCAAACGTTCCATCGCCGAAC
TGTGGGGCTAAGGAGCGGAT

Downstream 100 bases:

>100_bases
TGCAAAAGCTGAAACAGCAGGTATTTGAAGCCAACATGGATCTGCCGCGTTACGGGCTGGTGACCTTTACCTGGGGCAAC
GTCAGCGCCATTGACCGCGA

Product: L-xylulose 5-phosphate 3-epimerase

Products: NA

Alternate protein names: L-ascorbate utilization protein E; L-xylulose-5-phosphate 3-epimerase [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHR
RFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA

Sequences:

>Translated_284_residues
MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHR
RFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA
>Mature_284_residues
MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHR
RFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA

Specific function: Catalyzes the isomerization of L-xylulose-5-phosphate to L-ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization [H]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HUMPI family [H]

Homologues:

Organism=Escherichia coli, GI1790641, Length=284, Percent_Identity=99.2957746478873, Blast_Score=587, Evalue=1e-169,
Organism=Escherichia coli, GI87082294, Length=280, Percent_Identity=59.6428571428571, Blast_Score=342, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004560
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.1.3.22 [H]

Molecular weight: Translated: 32035; Mature: 32035

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLDWSREQRLAL
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHCCCCHHHHHHH
VNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYD
HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
VYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCE
QLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
EECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA
HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLDWSREQRLAL
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHCCCCHHHHHHH
VNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYD
HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
VYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCE
QLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
EECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA
HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA