| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yjfI [H]
Identifier: 218551451
GI number: 218551451
Start: 4343376
End: 4343771
Strand: Direct
Name: yjfI [H]
Synonym: EFER_4234
Alternate gene names: 218551451
Gene position: 4343376-4343771 (Clockwise)
Preceding gene: 218551450
Following gene: 218551452
Centisome position: 94.65
GC content: 36.11
Gene sequence:
>396_bases ATGGCATGGAACCCATTAGCGCTGGCTGATGCGCTACAAACCTGGCCTGATATTGATATTAAAAATAGTGAAAACGCATT AATCATGAAAATGAATGATTATGGCGATTTACAGATCAATATCATATTTACTTCGCGACAAATTATTATAGAAACATTTA TTTGCCCTGTAAGTTGTATTAAAAATCGTGAAGAATTTAATCTGTTTCTGTTAAGGAATCAGAAATTAATGCCGCTTTCT TCGGTAGGAATCTCCAGTATTCAGCACGAAGAATATTATGTGGTATTTGGTGCTTTATCACTCAATTCCTCACTCAGCGA CATTATGCTTGAGATTACTACGCTGGTCGATAACGCGATGGATCTCGCTGAAATCACAGAAGAATACTCACATTAA
Upstream 100 bases:
>100_bases AAAATTGGATGGTTTTTTTTTATCTATAGCTGATAAGATAATTATTGAAATAAAACATTCATTATATTAATCATTAACCT CAATTTATATGGAATAATAT
Downstream 100 bases:
>100_bases TTACAAGGACCAGTATTTATGGGGATTTTAAAAAGTTTATTTACGTTGGGTAAATCTGTGATCTCGCAAGCGGAAGAATC CATTGAAGAAGCACAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MAWNPLALADALQTWPDIDIKNSENALIMKMNDYGDLQINIIFTSRQIIIETFICPVSCIKNREEFNLFLLRNQKLMPLS SVGISSIQHEEYYVVFGALSLNSSLSDIMLEITTLVDNAMDLAEITEEYSH
Sequences:
>Translated_131_residues MAWNPLALADALQTWPDIDIKNSENALIMKMNDYGDLQINIIFTSRQIIIETFICPVSCIKNREEFNLFLLRNQKLMPLS SVGISSIQHEEYYVVFGALSLNSSLSDIMLEITTLVDNAMDLAEITEEYSH >Mature_130_residues AWNPLALADALQTWPDIDIKNSENALIMKMNDYGDLQINIIFTSRQIIIETFICPVSCIKNREEFNLFLLRNQKLMPLSS VGISSIQHEEYYVVFGALSLNSSLSDIMLEITTLVDNAMDLAEITEEYSH
Specific function: Unknown
COG id: COG3789
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790624, Length=133, Percent_Identity=81.203007518797, Blast_Score=222, Evalue=6e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019231 [H]
Pfam domain/function: PF09938 DUF2170 [H]
EC number: NA
Molecular weight: Translated: 14918; Mature: 14787
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNPLALADALQTWPDIDIKNSENALIMKMNDYGDLQINIIFTSRQIIIETFICPVSCI CCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCCEEEEEEEECCCEEEHHHHCHHHHH KNREEFNLFLLRNQKLMPLSSVGISSIQHEEYYVVFGALSLNSSLSDIMLEITTLVDNAM CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCHH DLAEITEEYSH HHHHHHHHHCC >Mature Secondary Structure AWNPLALADALQTWPDIDIKNSENALIMKMNDYGDLQINIIFTSRQIIIETFICPVSCI CCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCCEEEEEEEECCCEEEHHHHCHHHHH KNREEFNLFLLRNQKLMPLSSVGISSIQHEEYYVVFGALSLNSSLSDIMLEITTLVDNAM CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCHH DLAEITEEYSH HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]