| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is mutL [H]
Identifier: 218551440
GI number: 218551440
Start: 4330744
End: 4332591
Strand: Direct
Name: mutL [H]
Synonym: EFER_4223
Alternate gene names: 218551440
Gene position: 4330744-4332591 (Clockwise)
Preceding gene: 218551439
Following gene: 218551441
Centisome position: 94.38
GC content: 55.36
Gene sequence:
>1848_bases ATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGT CAAAGAACTGGTGGAAAACAGCCTCGATGCGGGTGCGACGCGTATTGATATTGATATCGAACGCGGTGGGGCGAAACTTA TCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAACTGGCGCTGGCGCTGGCGCGTCATGCTACCAGTAAAATC GCCTCTCTGGACGATCTCGAAGCTATTATCAGCCTGGGGTTCCGCGGTGAGGCGCTGGCGAGTATCAGTTCAGTTTCCCG TCTGACGCTCACTTCGCGCACCGTAGATCAGCAGGAAGCCTGGCAGGCATATGCCGAAGGGCGCGATATGGACGTGACGG TTAAACCGGCGGCGCATCCGGTGGGAACGACGCTGGAAGTGCTGGATCTGTTCTACAACACCCCGGCGCGGCGGAAATTC CTGCGTACCGAGAAAACCGAATTTAACCATATTGATGAAATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACTAT AAACCTGTCGCATAACGGAAAAATTGTGCGTCAGTATCGTGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGTTTAGGCG CGATTTGCGGCACCGCTTTTCTCGAACATGCGCTGGCGATTGAATGGCAGCACGGCGATCTCACGCTGCGCGGTTGGGTG GCAGATCCAAACCATACCACGCCCACACTGGCAGAAATTCAGTATTGCTACGTGAATGGTCGCATGATGCGCGATCGCCT GATCAATCATGCGATCCGTCAGGCCTGCGAAAACAAACTGGGGGCCGATCAGCAACCGGCATTTGTGTTGTATCTGGAGA TCGACCCACATCAAGTGGACGTCAACGTGCACCCCGCCAAACACGAAGTGCGTTTCCATCAGTCGCGTCTGGTGCACGAC TTTATCTATCAGGGCGTGCTGAGTGTGCTACAACAACAGCTGGAAACGCCGCTGCCACTGGACGATGAACCTCAACCTGC ACCGCGCACCATTCCGGAGAACCGCGTGGCCGCCGGGCGTAATCATTTTGCTGAACCGGCAGTTCGTGAACCGGTAGCTC CCCGCTACTCTCCTGCGCCCGCCTCTGGTGGTCGTCCAGCAGCTTCCTGGCCGAATGCGCAGCCAGGCTACCAGAAACAG CAAGGTGAAGTGTATCGCCAGCTTTTGCAAACGCCTGCGCCGATGCAAAAACCAAAAGCACCTGAACCGCAGGAGCCAGC GCTTGCGGCGAATAGTCAGAGTTTTGGTCGGGTACTGACTATCGTCCATTCCGACTGTGCGTTGCTGGAGCGCGACGGCA ACATTTCACTTTTAGCCCTGCCAGTGGCAGAACGTTGGCTGCGTCAGGCGCAGTTGACGCCGGGTGAAACGCCAGTTTGC GCCCAGCCGTTGCTTATTCCGTTGCGGCTAAAAGTTTCTGGCGAAGAAAAATCGGCATTAGAAAAAGCGCAGTCTGCCCT GGCGGAATTGGGTATTGATTTCCAGTCCGATGCACAGTATGTGACCATCAGGGCCGTGCCTTTACCCTTACGCCAACAAA ATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGG ATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATCACCCTGCTGGCGGACGTGGAACGGTT ATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAG ATGAGTGA
Upstream 100 bases:
>100_bases CCTTGCGCATCCGATGCAATCTGCGCCGCAGGGGGCAACGGCACAAACGGCCAGCACGGTGACGACGCCAGATCGCACGC TGCCAAACTAAGGATTATTG
Downstream 100 bases:
>100_bases TATCAGTAAGGCGAGCCTGCCTAAGGCGATTTTTTTGATGGGGCCGACGGCCTCCGGTAAAACGGCGTTAGCCATTGAGC TGCGTAAAATTTTACCAGTA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKI ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTVDQQEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKF LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHD FIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGRNHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQ QGEVYRQLLQTPAPMQKPKAPEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQLTPGETPVC AQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQSDAQYVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQW IARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE
Sequences:
>Translated_615_residues MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKI ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTVDQQEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKF LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHD FIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGRNHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQ QGEVYRQLLQTPAPMQKPKAPEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQLTPGETPVC AQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQSDAQYVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQW IARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE >Mature_614_residues PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIA SLDDLEAIISLGFRGEALASISSVSRLTLTSRTVDQQEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFL RTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWVA DPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDF IYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGRNHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQQ GEVYRQLLQTPAPMQKPKAPEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQLTPGETPVCA QPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQSDAQYVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWI ARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=339, Percent_Identity=35.9882005899705, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI4505911, Length=318, Percent_Identity=31.4465408805031, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI189458898, Length=350, Percent_Identity=30.5714285714286, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=30.0632911392405, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI4505913, Length=333, Percent_Identity=27.027027027027, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI310128478, Length=333, Percent_Identity=27.027027027027, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI263191589, Length=245, Percent_Identity=31.0204081632653, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI91992162, Length=362, Percent_Identity=24.585635359116, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI91992160, Length=362, Percent_Identity=24.585635359116, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI310128480, Length=295, Percent_Identity=23.3898305084746, Blast_Score=88, Evalue=3e-17, Organism=Escherichia coli, GI1790612, Length=615, Percent_Identity=97.3983739837398, Blast_Score=1223, Evalue=0.0, Organism=Caenorhabditis elegans, GI71991825, Length=324, Percent_Identity=37.037037037037, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17562796, Length=344, Percent_Identity=26.453488372093, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323819, Length=343, Percent_Identity=34.9854227405248, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6324247, Length=361, Percent_Identity=29.0858725761773, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6325093, Length=489, Percent_Identity=21.881390593047, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6323063, Length=215, Percent_Identity=30.2325581395349, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI17136968, Length=363, Percent_Identity=33.6088154269972, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI17136970, Length=359, Percent_Identity=27.2980501392758, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 67976; Mature: 67844
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTVDQQEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEHHHCCCHHHH WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV HHEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEE ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVD CCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEE VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGR EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCC NHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQLTPGETPVC CCCCCCCCCCCCCCHHHEEEEHCCCHHEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCC AQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQSDAQYVTIRAVPLPLRQQNLQILIP CCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEHH ELIGYLAKQSVFEPGNIAQWIARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QSVDLHPAIKALKDE HCCCCCHHHHHHCCC >Mature Secondary Structure PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTVDQQEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEHHHCCCHHHH WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV HHEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEE ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVD CCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEE VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGR EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCC NHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQLTPGETPVC CCCCCCCCCCCCCCHHHEEEEHCCCHHEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCC AQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQSDAQYVTIRAVPLPLRQQNLQILIP CCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEHH ELIGYLAKQSVFEPGNIAQWIARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QSVDLHPAIKALKDE HCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA