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The map label for this gene is yjeM [H]

Identifier: 218551428

GI number: 218551428

Start: 4316580

End: 4318082

Strand: Direct

Name: yjeM [H]

Synonym: EFER_4210

Alternate gene names: 218551428

Gene position: 4316580-4318082 (Clockwise)

Preceding gene: 218551427

Following gene: 218551429

Centisome position: 94.07

GC content: 45.24

Gene sequence:

>1503_bases
ATGAATCAATCAATAAAAAAGATGAGCCTTATGGGGCTCATACTTATGATCTTTACATCCGTATTTGGATTTGCAAATAG
CCCATCTGCTTTTTATTTAATGGGTTATAGTGCAATACCCTTTTATATTTTATCTGCATTGTTATTCTTTATTCCATTCG
CCTTAATGATGGCTGAAATGGGAGCCGCCTACCGTAAAGAGGAAGGGGGAATCTATTCCTGGATGAATAATAGCGTAGGG
CCACGCTATGCCTTTATTGGTACTTTTATGTGGTTCTCTTCTTACATCATCTGGATGGTAAGTACCTCTGCAAAGGTTTG
GGTTCCATTTTCCACTTTTCTTTTTGGTAGTGACATGACACAACACTGGCGCTTTGCGGGGCTGGAGCCTACGCAGGTGG
TAGGTTTACTGGCTGTTGCATGGATGATCATCGTTACCACCGTTGCGTCAAAAGGGATTAATAAAATCGCACGTATTACG
GCGGTAGGCGGTATTGCCGTAATGTGTCTTAATTTAGTATTGCTGTTAGTGAGTATTGCCATTTTGTTATTAAATGGTGG
TCATTTTGCGCAGGATATTAATTTTGTCACATCGCCAAATCCGGGATACCAGTCTGGACTGGCAATGTTGTCTTTTGTCG
TATTTGCCATATTTGCTTACGGCGGTATTGAAGCTGTCGGTGGACTGGTGGATAAAACGGAAAACCCGGAAAAAAACTTT
GCCAAAGGTATTGTGTTTGCCGCAATTGTTATTTCTATCGGTTATTCATTAGCAATATTCCAGTGGGGAGTTAGCACTAA
CTGGCAGCAAGTATTAAGTAACGGTTCCGTTAACCTGGGCAACATTACTTATATTTTGATGAAAAGTCTGGGAATGACGC
TAGGTAACGCGATGAATCTGTCCCCGGAATCAGCATTGACCCTGGGCGTATGGTTTGCGCGTATTACCGGGCTTTCAATG
TTCCTCGCCTACACTGGCGCGTTCTTTACGCTCTGCTATTCGCCACTGAAAGCTATTATCCAGGGAACGCCGAAAGCATT
GTGGCCGGAACCGATGACTCGCCTGAATACGATGGGTATGCCTTCTATCGCAATGTGGATGCAGTGCGGATTGGTTACTG
TCTTCATCCTGCTGGTTTCGTTTGGTGGTGGCACCGCATCGGCATTCTTTAACAAGCTAACGCTGATGGCGAACGTGTCT
ATGACGCTTCCTTACCTGTTCCTTGCACTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGAT
TTTCAAAACGCGTATGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCA
TTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCG
ATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAA

Upstream 100 bases:

>100_bases
CCCCAATTTATCTTGTTATTGAATGTCGATCTTCTTTAGGGAAATTGACATTAAACAGTGGGCGCTTTTTAAGGGTGCTC
GTGAGTGTGAGAGTAACTTA

Downstream 100 bases:

>100_bases
CCCGATGCCCTATCGTCTGCCTGACGATAGGGCGCAATGACAGGGAATTAGCGGGATTTCGTATGCGCTATAGCGAAATT
AAGCGACCGATTATCTCATG

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MNQSIKKMSLMGLILMIFTSVFGFANSPSAFYLMGYSAIPFYILSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVG
PRYAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLFGSDMTQHWRFAGLEPTQVVGLLAVAWMIIVTTVASKGINKIARIT
AVGGIAVMCLNLVLLLVSIAILLLNGGHFAQDINFVTSPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNF
AKGIVFAAIVISIGYSLAIFQWGVSTNWQQVLSNGSVNLGNITYILMKSLGMTLGNAMNLSPESALTLGVWFARITGLSM
FLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNTMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVS
MTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLA
MAIYQNYCSRVAKNPQWAVE

Sequences:

>Translated_500_residues
MNQSIKKMSLMGLILMIFTSVFGFANSPSAFYLMGYSAIPFYILSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVG
PRYAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLFGSDMTQHWRFAGLEPTQVVGLLAVAWMIIVTTVASKGINKIARIT
AVGGIAVMCLNLVLLLVSIAILLLNGGHFAQDINFVTSPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNF
AKGIVFAAIVISIGYSLAIFQWGVSTNWQQVLSNGSVNLGNITYILMKSLGMTLGNAMNLSPESALTLGVWFARITGLSM
FLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNTMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVS
MTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLA
MAIYQNYCSRVAKNPQWAVE
>Mature_500_residues
MNQSIKKMSLMGLILMIFTSVFGFANSPSAFYLMGYSAIPFYILSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVG
PRYAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLFGSDMTQHWRFAGLEPTQVVGLLAVAWMIIVTTVASKGINKIARIT
AVGGIAVMCLNLVLLLVSIAILLLNGGHFAQDINFVTSPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNF
AKGIVFAAIVISIGYSLAIFQWGVSTNWQQVLSNGSVNLGNITYILMKSLGMTLGNAMNLSPESALTLGVWFARITGLSM
FLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNTMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVS
MTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLA
MAIYQNYCSRVAKNPQWAVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082380, Length=500, Percent_Identity=95.2, Blast_Score=950, Evalue=0.0,
Organism=Escherichia coli, GI87081798, Length=467, Percent_Identity=21.8415417558887, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI48994921, Length=465, Percent_Identity=24.7311827956989, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787768, Length=471, Percent_Identity=24.416135881104, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 54815; Mature: 54815

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSIKKMSLMGLILMIFTSVFGFANSPSAFYLMGYSAIPFYILSALLFFIPFALMMAEM
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
GAAYRKEEGGIYSWMNNSVGPRYAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLFGSDMT
HHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEEEECHHHHHHCCCCH
QHWRFAGLEPTQVVGLLAVAWMIIVTTVASKGINKIARITAVGGIAVMCLNLVLLLVSIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLLNGGHFAQDINFVTSPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNF
HHHHCCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
AKGIVFAAIVISIGYSLAIFQWGVSTNWQQVLSNGSVNLGNITYILMKSLGMTLGNAMNL
HHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC
SPESALTLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNTMGM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
PSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQD
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHH
MAIYQNYCSRVAKNPQWAVE
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQSIKKMSLMGLILMIFTSVFGFANSPSAFYLMGYSAIPFYILSALLFFIPFALMMAEM
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
GAAYRKEEGGIYSWMNNSVGPRYAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLFGSDMT
HHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEEEECHHHHHHCCCCH
QHWRFAGLEPTQVVGLLAVAWMIIVTTVASKGINKIARITAVGGIAVMCLNLVLLLVSIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLLNGGHFAQDINFVTSPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNF
HHHHCCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
AKGIVFAAIVISIGYSLAIFQWGVSTNWQQVLSNGSVNLGNITYILMKSLGMTLGNAMNL
HHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC
SPESALTLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNTMGM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
PSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQD
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHH
MAIYQNYCSRVAKNPQWAVE
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]