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The map label for this gene is yjdA [H]

Identifier: 218551387

GI number: 218551387

Start: 4272450

End: 4274750

Strand: Direct

Name: yjdA [H]

Synonym: EFER_4168

Alternate gene names: 218551387

Gene position: 4272450-4274750 (Clockwise)

Preceding gene: 218551385

Following gene: 218551388

Centisome position: 93.11

GC content: 48.33

Gene sequence:

>2301_bases
ATGTACACACAAACAATATATGAATTAAGCCAGGAGGCTGAGCGATTATTGCTGCTAGCCATTGAACAGCTTGATGGCGC
GCAACATTCATCTGCCAGCCAGCAAGATACGGGTGTACCCACGGTAACTGAAGTAAAAGCCCAACGAGAAATGCTGCAAA
ACGAGTTATGCAAAGTGACGCGGCTTGAAATGGTGTTAGCCATTGTAGGCACGATGAAAGCAGGTAAATCGACGACAATC
AATGCCATTGTTGGCACAGAAGTATTACCTAACCGCAACCGGCCAATGACCGCGCTTCCTACTCTTATTCGCCATACTCC
AGGGCAAAAAGATCCCATACTGCATTTTTCACACGTTGCCCCTATCGATCAGTTAATGGCGGAGTTGCAACAGCGAATGC
ACACTTGTGATTATGCTTATCTGACCGAAGTCCTTGAGATCGATAAAGATATGCAGGCATTGCTGCAGCGAATAGAAACC
GGGCTGGGGTTCGAAAAGCATTATCTTGGCGCACAGCCTATTTTTCAGTGTCTGAAAAGTCTTAATGATCTGGTGCGCTT
ATCAAAAGCGCTACGGGTGGATTTTCCCTTTACCGACTATGCCACCCTTGAACATATTCCAGTAATAGAAGTGGAGTTTG
TTCATCTCGCCGGGCGTGCAGATTATCCGGGGCAATTGACGCTTCTCGATACACCTGGGCCAAACGAAGCCGGGCAACCT
CACCTGCAAAAAATGCTGAGAGAGCAACTGGCGCGAGCATCTGCGGTACTGGCGATTATGGATTACACGCAACTTAAATC
GGTGTCGGATGAAGATCTCCGCCAGACAATTGCCGCTGTTGGAAAATTGGTTCCGTTGTATGCGTTAGTGAATAAATTCG
ATCAACAAGATCGTAACAGTGATGATGAAGATCAAGTCAAAGCATTAATATCGGGCACGCTGATGAAGGGCTCGATTTCC
CCAGGGCAAATTTTTCCAGTGTCGTCGATGTGGGGGTATCTGGCGAATCGTGCACGGTACGAACTACAGCAATATGGGCG
ATTACCGGATCCTGATGAACAGCGTTGGGTGCGAGACTTTGCAGATGCAGCGTTGGGCAGGCGTTGGCGTAATACTGATT
TGACCGATAGCACCGCTATTCGCCAGGCTGCTGACCAGTTGTGGGAGGATTCGCTACTGGAATGCCCCATTCAGGCATTA
CTTCACGCAGCTTATGCAAACGCCTCGCTTTTTGCCTTGCGCTCGGCATCACATAAGATATTGAATTATGCGCAAACGAG
ACGTGATTCGCTTAATTTTCGTGAGCGAGCACTCAGTGTGGCCACTGAACAGTTACAGCAGCACATTGCACAGCTGGAAG
ATGATTTGCAGTTATTGAAAGTGAATCAGATGCAGGTTAACGATGAAATTAACCATGAAATCGTGCTGGCGCTGGCAGCT
GCGGACCACTATTTGCAGCAACGCCAGAGCGATATTTTGCGTCAGTTCGTCGCGTTGTTTAATCGGAAAAATGTTCACGA
TAAGGCCATGCGAGAAGGCTGGCTGCCGCAAGCAGACATCACTGACGAGACCTTAGTCTTACCCGACGAAGGCCAGGCGC
AGATCGTGCTAAGTAAAATTCGCGCGTCGTGTGAAGGCGTTTTGCTGGCGGCACAGGACGAGATTAGCCGTGATATGACG
CTTCGATTCACCCAACTGGAATCGACCCTTAACCGGACCTTAACTGAAGCCGTGCGTCCCATTGAACAGCGGGTGGTATC
AGCGTTGAATCATTCAGGATTTCATGCCCGTATACGTTTAGCACCATTGCACAGAACGATATTTAACTTCAATATCCGGC
CATTTTTCGTGGAGGCGATAGCGGAGGAAGCTCCTCCTGATCGCCAGGGACGAATGCGTGAAACCTTCTCCCGTTGGTTA
AATCAACCAGACTGGAGTGGTAACGAATATCTCAAAGAGAAGAGACGCTATACCCTGGAAATAACACGCCTGCACCAACA
CCTGGCAGACTATGTTCAACTGTTTTGCCAACAAATCAGCAAAGCTTTAACCGCTCACATCGATGTTTCTGTTACCGCCG
CAATGGCAGCTTTCTTTAGCGATTTCACGCGCGAACTGGCTGAAATTCAGCAAAACCTGCGCGAAAGCCTGGTTGTGCGT
CAGCACAATGAATCAGCACTCAATGTGTTACGAGAACAGTTAAAACAGACAATTTCCTCTACCGGATGGATGTTCGAAGA
TGCCCGTTTGCTTCGTGATGATATCCAGACACTTTTATTAACCGGGCATAATGATGACTAA

Upstream 100 bases:

>100_bases
AAATTATTTAATTCCAGGCGTAATTATCAAAGCTGTAAACACAATATTAATAATAAACGGCTTAGTAAAATAATTAAAAT
TTGCGTTAAGGAAGTATTTT

Downstream 100 bases:

>100_bases
CGCGATACTGACCGGGCCTGGACGCGTACTGGAATCGGTGCAGCCAAAGTTTATGGTCTCGCTGCTACAGGATGATGACG
CTACGGGTGAGATGCCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 766; Mature: 766

Protein sequence:

>766_residues
MYTQTIYELSQEAERLLLLAIEQLDGAQHSSASQQDTGVPTVTEVKAQREMLQNELCKVTRLEMVLAIVGTMKAGKSTTI
NAIVGTEVLPNRNRPMTALPTLIRHTPGQKDPILHFSHVAPIDQLMAELQQRMHTCDYAYLTEVLEIDKDMQALLQRIET
GLGFEKHYLGAQPIFQCLKSLNDLVRLSKALRVDFPFTDYATLEHIPVIEVEFVHLAGRADYPGQLTLLDTPGPNEAGQP
HLQKMLREQLARASAVLAIMDYTQLKSVSDEDLRQTIAAVGKLVPLYALVNKFDQQDRNSDDEDQVKALISGTLMKGSIS
PGQIFPVSSMWGYLANRARYELQQYGRLPDPDEQRWVRDFADAALGRRWRNTDLTDSTAIRQAADQLWEDSLLECPIQAL
LHAAYANASLFALRSASHKILNYAQTRRDSLNFRERALSVATEQLQQHIAQLEDDLQLLKVNQMQVNDEINHEIVLALAA
ADHYLQQRQSDILRQFVALFNRKNVHDKAMREGWLPQADITDETLVLPDEGQAQIVLSKIRASCEGVLLAAQDEISRDMT
LRFTQLESTLNRTLTEAVRPIEQRVVSALNHSGFHARIRLAPLHRTIFNFNIRPFFVEAIAEEAPPDRQGRMRETFSRWL
NQPDWSGNEYLKEKRRYTLEITRLHQHLADYVQLFCQQISKALTAHIDVSVTAAMAAFFSDFTRELAEIQQNLRESLVVR
QHNESALNVLREQLKQTISSTGWMFEDARLLRDDIQTLLLTGHNDD

Sequences:

>Translated_766_residues
MYTQTIYELSQEAERLLLLAIEQLDGAQHSSASQQDTGVPTVTEVKAQREMLQNELCKVTRLEMVLAIVGTMKAGKSTTI
NAIVGTEVLPNRNRPMTALPTLIRHTPGQKDPILHFSHVAPIDQLMAELQQRMHTCDYAYLTEVLEIDKDMQALLQRIET
GLGFEKHYLGAQPIFQCLKSLNDLVRLSKALRVDFPFTDYATLEHIPVIEVEFVHLAGRADYPGQLTLLDTPGPNEAGQP
HLQKMLREQLARASAVLAIMDYTQLKSVSDEDLRQTIAAVGKLVPLYALVNKFDQQDRNSDDEDQVKALISGTLMKGSIS
PGQIFPVSSMWGYLANRARYELQQYGRLPDPDEQRWVRDFADAALGRRWRNTDLTDSTAIRQAADQLWEDSLLECPIQAL
LHAAYANASLFALRSASHKILNYAQTRRDSLNFRERALSVATEQLQQHIAQLEDDLQLLKVNQMQVNDEINHEIVLALAA
ADHYLQQRQSDILRQFVALFNRKNVHDKAMREGWLPQADITDETLVLPDEGQAQIVLSKIRASCEGVLLAAQDEISRDMT
LRFTQLESTLNRTLTEAVRPIEQRVVSALNHSGFHARIRLAPLHRTIFNFNIRPFFVEAIAEEAPPDRQGRMRETFSRWL
NQPDWSGNEYLKEKRRYTLEITRLHQHLADYVQLFCQQISKALTAHIDVSVTAAMAAFFSDFTRELAEIQQNLRESLVVR
QHNESALNVLREQLKQTISSTGWMFEDARLLRDDIQTLLLTGHNDD
>Mature_766_residues
MYTQTIYELSQEAERLLLLAIEQLDGAQHSSASQQDTGVPTVTEVKAQREMLQNELCKVTRLEMVLAIVGTMKAGKSTTI
NAIVGTEVLPNRNRPMTALPTLIRHTPGQKDPILHFSHVAPIDQLMAELQQRMHTCDYAYLTEVLEIDKDMQALLQRIET
GLGFEKHYLGAQPIFQCLKSLNDLVRLSKALRVDFPFTDYATLEHIPVIEVEFVHLAGRADYPGQLTLLDTPGPNEAGQP
HLQKMLREQLARASAVLAIMDYTQLKSVSDEDLRQTIAAVGKLVPLYALVNKFDQQDRNSDDEDQVKALISGTLMKGSIS
PGQIFPVSSMWGYLANRARYELQQYGRLPDPDEQRWVRDFADAALGRRWRNTDLTDSTAIRQAADQLWEDSLLECPIQAL
LHAAYANASLFALRSASHKILNYAQTRRDSLNFRERALSVATEQLQQHIAQLEDDLQLLKVNQMQVNDEINHEIVLALAA
ADHYLQQRQSDILRQFVALFNRKNVHDKAMREGWLPQADITDETLVLPDEGQAQIVLSKIRASCEGVLLAAQDEISRDMT
LRFTQLESTLNRTLTEAVRPIEQRVVSALNHSGFHARIRLAPLHRTIFNFNIRPFFVEAIAEEAPPDRQGRMRETFSRWL
NQPDWSGNEYLKEKRRYTLEITRLHQHLADYVQLFCQQISKALTAHIDVSVTAAMAAFFSDFTRELAEIQQNLRESLVVR
QHNESALNVLREQLKQTISSTGWMFEDARLLRDDIQTLLLTGHNDD

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790548, Length=770, Percent_Identity=61.4285714285714, Blast_Score=899, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 87164; Mature: 87164

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTQTIYELSQEAERLLLLAIEQLDGAQHSSASQQDTGVPTVTEVKAQREMLQNELCKVT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKDPILHFSHVA
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHCC
PIDQLMAELQQRMHTCDYAYLTEVLEIDKDMQALLQRIETGLGFEKHYLGAQPIFQCLKS
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
LNDLVRLSKALRVDFPFTDYATLEHIPVIEVEFVHLAGRADYPGQLTLLDTPGPNEAGQP
HHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCH
HLQKMLREQLARASAVLAIMDYTQLKSVSDEDLRQTIAAVGKLVPLYALVNKFDQQDRNS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDEDQVKALISGTLMKGSISPGQIFPVSSMWGYLANRARYELQQYGRLPDPDEQRWVRDF
CHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ADAALGRRWRNTDLTDSTAIRQAADQLWEDSLLECPIQALLHAAYANASLFALRSASHKI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LNYAQTRRDSLNFRERALSVATEQLQQHIAQLEDDLQLLKVNQMQVNDEINHEIVLALAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHH
ADHYLQQRQSDILRQFVALFNRKNVHDKAMREGWLPQADITDETLVLPDEGQAQIVLSKI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHH
RASCEGVLLAAQDEISRDMTLRFTQLESTLNRTLTEAVRPIEQRVVSALNHSGFHARIRL
HHHHCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
APLHRTIFNFNIRPFFVEAIAEEAPPDRQGRMRETFSRWLNQPDWSGNEYLKEKRRYTLE
EHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ITRLHQHLADYVQLFCQQISKALTAHIDVSVTAAMAAFFSDFTRELAEIQQNLRESLVVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHNESALNVLREQLKQTISSTGWMFEDARLLRDDIQTLLLTGHNDD
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYTQTIYELSQEAERLLLLAIEQLDGAQHSSASQQDTGVPTVTEVKAQREMLQNELCKVT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKDPILHFSHVA
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHCC
PIDQLMAELQQRMHTCDYAYLTEVLEIDKDMQALLQRIETGLGFEKHYLGAQPIFQCLKS
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
LNDLVRLSKALRVDFPFTDYATLEHIPVIEVEFVHLAGRADYPGQLTLLDTPGPNEAGQP
HHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCH
HLQKMLREQLARASAVLAIMDYTQLKSVSDEDLRQTIAAVGKLVPLYALVNKFDQQDRNS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDEDQVKALISGTLMKGSISPGQIFPVSSMWGYLANRARYELQQYGRLPDPDEQRWVRDF
CHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ADAALGRRWRNTDLTDSTAIRQAADQLWEDSLLECPIQALLHAAYANASLFALRSASHKI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LNYAQTRRDSLNFRERALSVATEQLQQHIAQLEDDLQLLKVNQMQVNDEINHEIVLALAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHH
ADHYLQQRQSDILRQFVALFNRKNVHDKAMREGWLPQADITDETLVLPDEGQAQIVLSKI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHH
RASCEGVLLAAQDEISRDMTLRFTQLESTLNRTLTEAVRPIEQRVVSALNHSGFHARIRL
HHHHCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
APLHRTIFNFNIRPFFVEAIAEEAPPDRQGRMRETFSRWLNQPDWSGNEYLKEKRRYTLE
EHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ITRLHQHLADYVQLFCQQISKALTAHIDVSVTAAMAAFFSDFTRELAEIQQNLRESLVVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHNESALNVLREQLKQTISSTGWMFEDARLLRDDIQTLLLTGHNDD
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 7610040; 9278503 [H]