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The map label for this gene is dsdX [H]

Identifier: 218551207

GI number: 218551207

Start: 4076418

End: 4077755

Strand: Direct

Name: dsdX [H]

Synonym: EFER_3972

Alternate gene names: 218551207

Gene position: 4076418-4077755 (Clockwise)

Preceding gene: 218551205

Following gene: 218551208

Centisome position: 88.84

GC content: 49.33

Gene sequence:

>1338_bases
ATGCACTCTCAAATCTGGGTTGTGAGCACGCTGCTTATCAGCATCGTGTTAATTGTACTGACCATCGTGAAGTTCAAATT
CCACCCGTTTCTGGCGCTGTTGCTGGCCAGCTTCTTCGTGGGAACGATGATGGGTATGGGGCCACTGGATATGGTAAACG
CTATTGAAAGTGGAATTGGCGGAACACTGGGTTTCCTTGCTGCGGTTATCGGCCTTGGCACGATACTGGGAAAAATGATG
GAAGTATCCGGTGCCGCAGAAAGAATTGGTCTGACACTTCAGCGCTGCCGCTGGCTTTCAGCTGATGTCATTATGGTGCT
GGTTGGCCTGATTTGCGGCATCACGCTGTTTGTTGAAGTGGGCGTCGTGCTATTGATTCCTCTGGCTTTTTCAATTGCCA
AAAAAACCAATACCTCATTGTTAAAGCTGGCCATTCCGCTGTGTACTGCATTGATGGCAGTGCACTGCGTGGTTCCTCCA
CATCCGGCTGCTTTATATGTTGCCAATAAGCTGGGCGCAGATATCGGTTCGGTGATCGTCTACGGTTTGCTGGTTGGGCT
GATGGCATCACTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGGCAACGACTGCCCTTTAAACCTGTACCCACAGAGT
TTGCCGATCTGCAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTGACCGTACTACTGCCCATTGCG
CTGATGTTGGTGAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATAGCTTGCTTGAGTTTATTGGCAA
CCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGTCAGCATATGAGCATGGGGACGA
TGCTCACACATACGGAAAATGGTTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCC
ATTTTAAAAAGCAGCAGTCTCGCTGATACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATACTTCTGGCCTG
GTTGGTGGCACTTATTCTGCATGCTGCGGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCACCCA
TGCTGCCGCTATATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCGATTGGCTGCACGATCGTT
ACGGACTCGCTTTTCTGGCTGGTGAAGCAATATTGCGGCGCTACGCTCAATGAAACATTTAAATACTATACGACAGCGAC
ATTTATCGCTTCAGTCGTCGCTCTGGCGGGCACATTCCTGCTGTCATTTATCATCTAA

Upstream 100 bases:

>100_bases
GCTGCAATTTAGCTCATGTGAAAGGCAAATTTTATCGTTTGTCAGCCTGCGTTGTTTTTTTGTCCAATATCATCAGGTTA
ATCACAGGGGAAGGTGAGAT

Downstream 100 bases:

>100_bases
GCGCAAAGAGACGTACTATGGAAAACGCTAAAATGAACTCGCTCATCGCCCAGTATCCGTTGGTAAAGGATCTGGTTGCT
CTTAAAGAAACCACCTGGTT

Product: permease DsdX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP
HPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLQVRDEKTLPSLGATLLTVLLPIA
LMLVKTIAELNMARESGLYSLLEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNA
ILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIV
TDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII

Sequences:

>Translated_445_residues
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP
HPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLQVRDEKTLPSLGATLLTVLLPIA
LMLVKTIAELNMARESGLYSLLEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNA
ILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIV
TDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
>Mature_445_residues
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP
HPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLQVRDEKTLPSLGATLLTVLLPIA
LMLVKTIAELNMARESGLYSLLEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNA
ILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIV
TDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII

Specific function: Probable permease for an unknown substrate [H]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=445, Percent_Identity=98.6516853932584, Blast_Score=865, Evalue=0.0,
Organism=Escherichia coli, GI48994935, Length=440, Percent_Identity=36.5909090909091, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1790716, Length=430, Percent_Identity=32.3255813953488, Blast_Score=244, Evalue=6e-66,
Organism=Escherichia coli, GI1790776, Length=446, Percent_Identity=31.8385650224215, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI2367370, Length=417, Percent_Identity=34.2925659472422, Blast_Score=221, Evalue=8e-59,
Organism=Escherichia coli, GI48994939, Length=429, Percent_Identity=35.4312354312354, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1789097, Length=437, Percent_Identity=29.2906178489703, Blast_Score=164, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 47076; Mature: 47076

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
GTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH
YGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLQVRDEKTLPSLGATLLTVLLPIA
HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHCCEECCCCCCHHHHHHHHHHHHHHH
LMLVKTIAELNMARESGLYSLLEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTEN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCC
GFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSA
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETF
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
KYYTTATFIASVVALAGTFLLSFII
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
GTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH
YGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLQVRDEKTLPSLGATLLTVLLPIA
HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHCCEECCCCCCHHHHHHHHHHHHHHH
LMLVKTIAELNMARESGLYSLLEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTEN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCC
GFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSA
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETF
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
KYYTTATFIASVVALAGTFLLSFII
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592420; 3275618; 9205837; 9278503; 3029015; 1659648; 12218016 [H]