Click here to switch to the map view.

The map label for this gene is yicS [H]

Identifier: 218551189

GI number: 218551189

Start: 4056819

End: 4057112

Strand: Direct

Name: yicS [H]

Synonym: EFER_3954

Alternate gene names: 218551189

Gene position: 4056819-4057112 (Clockwise)

Preceding gene: 218551188

Following gene: 218551191

Centisome position: 88.41

GC content: 45.58

Gene sequence:

>294_bases
ATGAAACCAACGATGCTGTTGCTTATTACTGCCTTTTTCATCTTGCCAGGCCTCGCACTGGCCGATTCACCATTCAGTTC
GCTGCAATCGGCAAATGAAAAAAAGACCGTATTAGCTGATTTACGGAAAATATGTACTCCACAAGCGTCAATATCAGAGG
AGGCCTGGGAAAAGATGATGTTGTCTGACGAAAGTAATCAGCAGCACATCCGTGAGGCTATTGTGGCGATGGAACGCAAT
AACCAGAACAATTACTGGGAAGCGTTAGGCAAGGTTGAATGCCCGGATATGTAG

Upstream 100 bases:

>100_bases
CTTACTGATTGCGCCATACATATTTCGTACAGGTAGATGAGGGAAACAAAAGCTGTCTACACTTACTCTTTATACAATGT
GGAGCTAAAAGGGTGAGTCC

Downstream 100 bases:

>100_bases
ACGTGAAGTCGTCGCTTCACGTCACACATTTAGCACTTAACGTGAACGTACATCGGGAATAATTAAATCACCACGCAAAA
CATATGAACCCAGCATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKPTMLLLITAFFILPGLALADSPFSSLQSANEKKTVLADLRKICTPQASISEEAWEKMMLSDESNQQHIREAIVAMERN
NQNNYWEALGKVECPDM

Sequences:

>Translated_97_residues
MKPTMLLLITAFFILPGLALADSPFSSLQSANEKKTVLADLRKICTPQASISEEAWEKMMLSDESNQQHIREAIVAMERN
NQNNYWEALGKVECPDM
>Mature_97_residues
MKPTMLLLITAFFILPGLALADSPFSSLQSANEKKTVLADLRKICTPQASISEEAWEKMMLSDESNQQHIREAIVAMERN
NQNNYWEALGKVECPDM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082307, Length=97, Percent_Identity=81.4432989690722, Blast_Score=171, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10944; Mature: 10944

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTMLLLITAFFILPGLALADSPFSSLQSANEKKTVLADLRKICTPQASISEEAWEKMM
CCCHHHHHHHHHHHHCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LSDESNQQHIREAIVAMERNNQNNYWEALGKVECPDM
HCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MKPTMLLLITAFFILPGLALADSPFSSLQSANEKKTVLADLRKICTPQASISEEAWEKMM
CCCHHHHHHHHHHHHCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LSDESNQQHIREAIVAMERNNQNNYWEALGKVECPDM
HCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]