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The map label for this gene is hemY [H]

Identifier: 218550976

GI number: 218550976

Start: 3795333

End: 3796529

Strand: Direct

Name: hemY [H]

Synonym: EFER_3703

Alternate gene names: 218550976

Gene position: 3795333-3796529 (Clockwise)

Preceding gene: 218550975

Following gene: 218550977

Centisome position: 82.71

GC content: 55.64

Gene sequence:

>1197_bases
ATGTTAAAAGTGTTATTGCTCTTTGTGTTGCTGATTGCGGGGATCGTGGTCGGCCCGATGATTGCCGGGCATCAGGGTTA
TGTACTGATCCAGACCGATACCTACAATATCGAAACCAGCGTCACTGGCCTGGCGATTATTTTGATTCTGGCGATGGTGG
TGCTGTTTGCCATTGAGTGGCTACTGCGACGGATCTTCCGCACCGGCGCACACACCCGCGGGTGGTTTGTCGGACGTAAG
CGTCGCCGTGCGCGTAAGCAGACCGAACAGGCGCTACTGAAACTTGCTGAAGGTGATTATCAGCAAGTTGAAAAACTGAT
GGCGAAAAATGCCGATCACGCTGAACAGCCGGTGGTGAACTATCTGCTGGCTGCCGAAGCCGCGCAACAACGTGGTGATG
AAGCGCGCGCCAATCAGCATCTGGAACGCGCCGCAGAGCTGGCAGGTAACGACACCATCCCGGTGGAAATCACCCGTGTG
CGTCTGCAACTGGCCCGTAATGAAAATCACGCCGCTCGCCACGGTGTGGATAAGTTGCTGGAAATTACGCCACGCCATCC
AGAAGTGCTGCGTCTGGCGGAACAAGCGTATATCCGCACCGGTGCATGGAGTTCGCTGCTGGATATTATCCCATCGATGG
CGAAAGCCCACGTTGGCGATGAAGAACATCGTGCAATGCTGGAACAACAGGCATGGATTGGCCTGATGGATCAGGCGCGT
GCCGATGACGGTAGCGAAGGTTTGCGAAACTGGTGGAAAAACCAAAGCAGGAAAACGCGTCAACAGGTGGCGTTGCAGGT
GGCAATGGCGGAACATCTTATTGAGTGTGACGATCATGATACTGCCCAGCAAATTATCATCGACGGCCTGAAACGCCAGT
ATGACGATCGCCTGCTGCTGCCGATCCCGCGCCTGAAAACCAATAACCCGGAACAGCTTGAAAAAGTGCTGCGCCAACAG
ATCAAAAACGTGGGCGATCGTCCGCTGCTGTGGAGCACACTGGGTCAGTCGCTGATGAAGCACGGAGAATGGCAGGAAGC
ATCGCTCGCCTTCCGCGCAGCGCTGAAACAACGTCCGGACGCCTACGATTACGCATGGCTTGCCGACGCGCTGGACAGAC
TGCACAAGCCGGAAGAAGCCGCAGAAATGCGCCGCGATGGCTTGATGCTGACGTTGCAGAACAACCCGCCACAGTAA

Upstream 100 bases:

>100_bases
GCGTACGTAACCTGCTGGCACAACCTGCTGCTCCAGCAACGGAACCGACTCCTGCTCCACAAGTCGATACTCCGGCAGCT
GCGCCGCAAGGAGAATAACC

Downstream 100 bases:

>100_bases
TTTATATCGCCTCGTTCAGAGGCGATATTTTTTACAAGGATGTCAAAATGCGTATGCCGTCCCACTCGCTTTTCCGCTTG
CCATCGCCTGAAATTAATCC

Product: protoheme IX biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK
RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
RLQLARNENHAARHGVDKLLEITPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR
ADDGSEGLRNWWKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQ
IKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAEMRRDGLMLTLQNNPPQ

Sequences:

>Translated_398_residues
MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK
RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
RLQLARNENHAARHGVDKLLEITPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR
ADDGSEGLRNWWKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQ
IKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAEMRRDGLMLTLQNNPPQ
>Mature_398_residues
MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK
RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
RLQLARNENHAARHGVDKLLEITPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR
ADDGSEGLRNWWKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQ
IKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAEMRRDGLMLTLQNNPPQ

Specific function: Involved in a late step of protoheme IX synthesis [H]

COG id: COG3071

COG function: function code H; Uncharacterized enzyme of heme biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1790234, Length=398, Percent_Identity=98.7437185929648, Blast_Score=798, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010817
- InterPro:   IPR005254
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07219 HemY_N; PF07719 TPR_2 [H]

EC number: NA

Molecular weight: Translated: 45297; Mature: 45297

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEW
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVN
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH
YLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRVRLQLARNENHAARHGVDKLL
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
EITPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR
HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
ADDGSEGLRNWWKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLL
CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEC
PIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
AYDYAWLADALDRLHKPEEAAEMRRDGLMLTLQNNPPQ
CCHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure
MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEW
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVN
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH
YLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRVRLQLARNENHAARHGVDKLL
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
EITPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR
HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
ADDGSEGLRNWWKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLL
CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEC
PIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
AYDYAWLADALDRLHKPEEAAEMRRDGLMLTLQNNPPQ
CCHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]