| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550970
Identifier: 218550970
GI number: 218550970
Start: 3787808
End: 3789121
Strand: Direct
Name: 218550970
Synonym: EFER_3696
Alternate gene names: NA
Gene position: 3787808-3789121 (Clockwise)
Preceding gene: 218550969
Following gene: 218550971
Centisome position: 82.55
GC content: 46.19
Gene sequence:
>1314_bases ATGAATGGTCAAATAATCACAGTTGCACTCATCCTGTTGGGGCACATATTTCTGACGCCTGCTGTACAGGCCATAGGGTT CGACTATTACAATGATCACGGTGTTATGTCTTACGGTAAAGGTTATGGGGAGGATGAGAAAATCATTGCCCAATTTCCGA AGATGAACAGAGCCGATTTGCGCCTTGTGACAAATATATCCGGGGAGCGGGAGTTGGTGGAAGGCTATATACCCACCGAT GAAATAAGCATAAAAAATGAGGAATACCACTGGGTGACAGACGGCCGCGTTATTCTCTGGCGTGGCAAAATCGTTAGCAA TCCACCGGGAACACCCACTGTCGATATTGCCAGCTTTCAGGCTATGGGCCGCTTCGCGGTCGATAAATATAGCCTCTATT TTGACGGACAGCGCACCGAAAGTAATAGCGGCGCGTCACGTGTTGATCTGGCGACACTAAAAGCTATCGAAGGTAACTCT ACCACGCTGGTGGATAGTAAAAATCTCTACTTGTCTGGTCGACGTCAGGGGAGCAGCAGTAATGTTACTGTATTAGAAAA AAGATGGTGGGGTATTAATCCACGTCTTATGAGTGTAAACAGAAATTCGTATGCCAATGATCTACTTATCCGCAGTGGGC AGAACATTTATTTAAATGGCGTTCGCCTTGCAGCGAATGCAGATTCATTTGAGATAATTCGCTGGATACCCCATTCACTG CTGGTTTTTCGCGACAACAAGGGTTTGCATCGTTATCCCTTTGGTCAATTATCAGGCAAGGCAATACCCGTAGATGATGA CGTCTCTTTTGAAGTAGGGGAAAGTCGCGTTCGCTGGCGTAAACAGCTCACGCCCGACCGTCAGTGGAGCCAGTGGATAG ACCTACCAGGTATTGAACCTGAACAATTTCATCTGATTACTGACAATATTGCGCAGTATAAAGATCGGCTGTATGTAACA AAATTATCGACTTTTGGTGAAGACCAGCTTGAAATAATCCCGCTGGATTCGCCAGACCTGGTCATTGATCACTCATTTAA TCGCGGCAAACAGCATGCTTACTTTATCCACCTATTACGGTCACGCAAGAGCGTGCAAATTATTCCAGTTAACGGTCCGC TAACTAAAAACGATCGCTTCGCTTATGACGATCGCAATGTTTATACATGGACCGATACAGAGGTAAGGATTACACCCTCC CCCTGCCCAGCGAAAACATACGTCAGAGAAAAGAATGTCCGTGAAATTCATAACAGCGACATTATTATTCCGGTGACGGA GGAATCGTGCCGGAACGCAGCAGCAGACGGGTAA
Upstream 100 bases:
>100_bases CGGGATATGGCTACGGGGTAAATTACAAAACGGGATATCTGGACGGAAAAATTACCGATGACGGCGAATTTATTCCTGCC CCGCGCAATGAGGCGACAAA
Downstream 100 bases:
>100_bases ACTTTGAAGCCCTGACACCATGCCGCTATACTGCCGCCATCACCTAAAAACAGGAAACAACAATGAACGACAGTGAATTT CATCGCCTGGCCGATACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYGEDEKIIAQFPKMNRADLRLVTNISGERELVEGYIPTD EISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQAMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNS TTLVDSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNSYANDLLIRSGQNIYLNGVRLAANADSFEIIRWIPHSL LVFRDNKGLHRYPFGQLSGKAIPVDDDVSFEVGESRVRWRKQLTPDRQWSQWIDLPGIEPEQFHLITDNIAQYKDRLYVT KLSTFGEDQLEIIPLDSPDLVIDHSFNRGKQHAYFIHLLRSRKSVQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPS PCPAKTYVREKNVREIHNSDIIIPVTEESCRNAAADG
Sequences:
>Translated_437_residues MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYGEDEKIIAQFPKMNRADLRLVTNISGERELVEGYIPTD EISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQAMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNS TTLVDSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNSYANDLLIRSGQNIYLNGVRLAANADSFEIIRWIPHSL LVFRDNKGLHRYPFGQLSGKAIPVDDDVSFEVGESRVRWRKQLTPDRQWSQWIDLPGIEPEQFHLITDNIAQYKDRLYVT KLSTFGEDQLEIIPLDSPDLVIDHSFNRGKQHAYFIHLLRSRKSVQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPS PCPAKTYVREKNVREIHNSDIIIPVTEESCRNAAADG >Mature_437_residues MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYGEDEKIIAQFPKMNRADLRLVTNISGERELVEGYIPTD EISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQAMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNS TTLVDSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNSYANDLLIRSGQNIYLNGVRLAANADSFEIIRWIPHSL LVFRDNKGLHRYPFGQLSGKAIPVDDDVSFEVGESRVRWRKQLTPDRQWSQWIDLPGIEPEQFHLITDNIAQYKDRLYVT KLSTFGEDQLEIIPLDSPDLVIDHSFNRGKQHAYFIHLLRSRKSVQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPS PCPAKTYVREKNVREIHNSDIIIPVTEESCRNAAADG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49680; Mature: 49680
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYGEDEKIIAQFPKMNRADL CCCCEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCHHHHHCCCCCCCCE RLVTNISGERELVEGYIPTDEISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQ EEEECCCCCHHHHCCCCCCCCEEECCCCEEEEECCEEEEEECEEECCCCCCCEEEEHHHH AMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNSTTLVDSKNLYLSGRRQGSSS HHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEECCCCCCC NVTVLEKRWWGINPRLMSVNRNSYANDLLIRSGQNIYLNGVRLAANADSFEIIRWIPHSL CEEEEEEECCCCCCEEEEECCCCCCCEEEEECCCEEEEEEEEEEECCCCEEEEEECCCEE LVFRDNKGLHRYPFGQLSGKAIPVDDDVSFEVGESRVRWRKQLTPDRQWSQWIDLPGIEP EEEECCCCCEECCCCCCCCCEECCCCCCCEECCCHHHHHHHHCCCCCCHHHHCCCCCCCC EQFHLITDNIAQYKDRLYVTKLSTFGEDQLEIIPLDSPDLVIDHSFNRGKQHAYFIHLLR CEEEEECCCHHHHHHEEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEEHH SRKSVQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSPCPAKTYVREKNVREIHNSD CCCCEEEEECCCCCCCCCCEEECCCEEEEEECCEEEECCCCCCCHHHHHHCCHHHHCCCC IIIPVTEESCRNAAADG EEEEECHHHHCCCCCCC >Mature Secondary Structure MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYGEDEKIIAQFPKMNRADL CCCCEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCHHHHHCCCCCCCCE RLVTNISGERELVEGYIPTDEISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQ EEEECCCCCHHHHCCCCCCCCEEECCCCEEEEECCEEEEEECEEECCCCCCCEEEEHHHH AMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNSTTLVDSKNLYLSGRRQGSSS HHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEECCCCCCC NVTVLEKRWWGINPRLMSVNRNSYANDLLIRSGQNIYLNGVRLAANADSFEIIRWIPHSL CEEEEEEECCCCCCEEEEECCCCCCCEEEEECCCEEEEEEEEEEECCCCEEEEEECCCEE LVFRDNKGLHRYPFGQLSGKAIPVDDDVSFEVGESRVRWRKQLTPDRQWSQWIDLPGIEP EEEECCCCCEECCCCCCCCCEECCCCCCCEECCCHHHHHHHHCCCCCCHHHHCCCCCCCC EQFHLITDNIAQYKDRLYVTKLSTFGEDQLEIIPLDSPDLVIDHSFNRGKQHAYFIHLLR CEEEEECCCHHHHHHEEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEEHH SRKSVQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSPCPAKTYVREKNVREIHNSD CCCCEEEEECCCCCCCCCCEEECCCEEEEEECCEEEECCCCCCCHHHHHHCCHHHHCCCC IIIPVTEESCRNAAADG EEEEECHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA