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The map label for this gene is dgoA [H]

Identifier: 218550925

GI number: 218550925

Start: 3739395

End: 3740099

Strand: Direct

Name: dgoA [H]

Synonym: EFER_3651

Alternate gene names: 218550925

Gene position: 3739395-3740099 (Clockwise)

Preceding gene: 218550924

Following gene: 218550926

Centisome position: 81.49

GC content: 54.18

Gene sequence:

>705_bases
ATGCCACTGAACAGGGGTTATGGCGAATCGCCCACGCTGCCGGGCTACTCTCCACCAACGCCAGGGAATGTACTCATGCC
ATTTAATACGCTTTTGCAAAAAACCGGGTTAGTCGCCATTTTACGCGGCGTGAAACCGGATGAGATTGTCGCCATCGGTG
AAAAGCTGTATGCCGCTGGATTTCGCCTGATTGAGATTCCCATGAACTCGCCGGAGCCGTTGCAAAGTATCAGTTTACTG
CGCGACGCCCTGCCTAAGGACTGCCTGGTCGGAGCCGGAACTGTGCTTTCGGTGGAGCAAGTCGTCGCGGTTAAAGAGGC
TGGAGGCCAGATTATCGTGATGCCGCATTGCGATACTGCGGTGATCCGTCGTGCCCGTGCGCTGGGTATGTATTGTGCGC
CTGGCGTCGCTACGCCCACCGAAGCTTTTGCTGCCATTGAACATGGCGCCAATGCCATCAAGCTGTTCCCGGCTGAACAA
ATTACGCCTGAAGTCACCAAAGCCTGGCGTGCGGTTATTCCACAATCCGTTCCGATGTTACCGGTTGGCGGTATCACTCC
AGACACAATGGCGCGTTATCTGAGCCACGGCGCAAACGGCTTTGGCCTCGGTTCTGCGCTATATCGCCCCGGCATGACGC
CAGAGCAAGTCTATGAAAATGCAGTACTGTTTATGAATGCATGGAACAATTTAAATAGCAACTAA

Upstream 100 bases:

>100_bases
ACAACACCGATCGCCTTAATCGGTAGCGCCACTCTGAACAGCCGCTATTCACAAGCATTCAGCCACGTTTTTCCCGACAG
ACAGCTACACGCCATTCCTA

Downstream 100 bases:

>100_bases
CTGATAAATAAGGATATAAAAGCAATGATAAAACATCTTACCTTACCGAAAAAAATGGCTGCAATGGTACTTCTTGCCGG
CGCTGCCCTCAGCACTGCGC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPLNRGYGESPTLPGYSPPTPGNVLMPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEPLQSISLL
RDALPKDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQ
ITPEVTKAWRAVIPQSVPMLPVGGITPDTMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN

Sequences:

>Translated_234_residues
MPLNRGYGESPTLPGYSPPTPGNVLMPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEPLQSISLL
RDALPKDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQ
ITPEVTKAWRAVIPQSVPMLPVGGITPDTMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN
>Mature_233_residues
PLNRGYGESPTLPGYSPPTPGNVLMPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEPLQSISLLR
DALPKDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQI
TPEVTKAWRAVIPQSVPMLPVGGITPDTMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=194, Percent_Identity=45.8762886597938, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1788156, Length=151, Percent_Identity=29.1390728476821, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 24889; Mature: 24758

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNRGYGESPTLPGYSPPTPGNVLMPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAG
CCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
FRLIEIPMNSPEPLQSISLLRDALPKDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTA
CEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHH
VIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPML
HHHHHHHHCCEECCCCCCHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHCCCCCCCC
PVGGITPDTMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN
CCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCEEEEEECCCCCCCC
>Mature Secondary Structure 
PLNRGYGESPTLPGYSPPTPGNVLMPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAG
CCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
FRLIEIPMNSPEPLQSISLLRDALPKDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTA
CEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHH
VIRRARALGMYCAPGVATPTEAFAAIEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPML
HHHHHHHHCCEECCCCCCHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHCCCCCCCC
PVGGITPDTMARYLSHGANGFGLGSALYRPGMTPEQVYENAVLFMNAWNNLNSN
CCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]