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The map label for this gene is rmuC [H]

Identifier: 218550922

GI number: 218550922

Start: 3736042

End: 3737469

Strand: Reverse

Name: rmuC [H]

Synonym: EFER_3648

Alternate gene names: 218550922

Gene position: 3737469-3736042 (Counterclockwise)

Preceding gene: 218550929

Following gene: 218550921

Centisome position: 81.45

GC content: 51.75

Gene sequence:

>1428_bases
GTGGATATCTCAATCATGGTTTACGCAGTTATTGCGTTGGTGAGCGTGGCGATTGGCTGGCTGATTGCCAGTTATCAGCA
TGCGCAGCAAAAAGCCGAGCAATTCGCTGAACGTGAAGAGATGGTCGCGGAGTTAAGTGCGGCAAAACAACAAATTACCC
AAAGCGAACATTGGCGTGCTGAGTGCGAGTTACTCAATAATGAAGTGCGCAGTCTGCAAAGCATTAACACCTCGCTGGAG
GCGGATCTGCGTGAAGTCACCACGCGGATGGAAGCTGCGCAGCAACATGCTGACGATAAAATTCGCCAAATGATCAACAG
CGAACAGCGCCTCAGTGAGCAGTTTGAAAACCTCGCCAACCGTATTTTCGAGCACAGCAATCGCCGGGTTGATGAGCAAA
ACCGTCAGAGTCTGAACAGCCTGTTGTCGCCGCTACGTGAACAACTGGACGGTTTTCGCCGTCAGGTTCAGGAGAGCTTT
GGTAAAGAAGCACAAGAACGCCATACGCTGGCGCATGAAATCCGCAATCTCCAGCAGCTTAATGCGCAAATGGCCCAGGA
AGCCATTAACCTCACTCGCGCCCTGAAAGGCGACAATAAAACCCAGGGCAACTGGGGCGAAGTGGTGCTAACCCGCGTAC
TGGAGGCGTCTGGTCTGCGTGAAGGGTATGAATATCAGACTCAGGTGAGCATCGAAACCGACACGCGTTCGCGAATGCAA
CCAGATGTCATTGTGCGGTTGCCGCAGGGCAAAGATGTGGTGATCGACGCCAAAATGACGCTGGTTGCCTATGAACGTTA
TTTCAACGCTGAAGATGACTACGCACGTGAAAGCGCGCTACAGGAGCATATCGCGTCGGTGCGTAACCATATCCGCTTAC
TGGGGCGCAAAGATTATCAACAACTGCCGGGGCTGCGAACCCTGGATTACGTGCTGATGTTTATCCCTGTTGAACCCGCT
TTTTTACTGGCGCTTGACCGCCAGCCGGAGCTGATCACCGAAGCGTTGAAAAACAATATCATGCTGGTTAGCCCGACCAC
GCTGCTGGTGGCGCTGCGCACTATCGCCAACCTCTGGCGCTATGAGCATCAAAGCCGCAACGCTCAGAAAATAGCCGATC
GCGCCAGCAAGTTGTACGACAAAATGCGCTTGTTTGTCGATGATATGTCCGCGATCGGTCAAAGTCTGGACAAAGCACAG
GACAACTATCGTCAGGCAATGAAAAAACTCTCTTCAGGTCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTT
AGGGGTAGAAATTAAACGCGAGATTAATCCTGAATTGACTGATCAGGCGGTAAACCAGGATGAGGAGTACCGTTTACGAT
CAGTTCCGGAGCAGCCGAATGATGAAGTTTATCAACGCGATGAAGAATATAATCAACAGTCGCACTAG

Upstream 100 bases:

>100_bases
GATCGTTTTGCGTAGCGCCTCGCAGGAAACTTCTTTCAAACTGGACGTTTGTACAGCACAATTCTATTTTGTGCGGGTAA
GTAATGAGGCTGGAGGCGTT

Downstream 100 bases:

>100_bases
CTCTTTGGGGGTAGTGAGGCCGGGCGGAAATGTAGGGCAATGACGCCCAATCTGTTACACTTCTGGAACAATTTTTTGAT
GAGCAGGCACTGAGATGGTG

Product: DNA recombination protein RmuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MDISIMVYAVIALVSVAIGWLIASYQHAQQKAEQFAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLE
ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQESF
GKEAQERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDTRSRMQ
PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYARESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA
FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQKIADRASKLYDKMRLFVDDMSAIGQSLDKAQ
DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPELTDQAVNQDEEYRLRSVPEQPNDEVYQRDEEYNQQSH

Sequences:

>Translated_475_residues
MDISIMVYAVIALVSVAIGWLIASYQHAQQKAEQFAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLE
ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQESF
GKEAQERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDTRSRMQ
PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYARESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA
FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQKIADRASKLYDKMRLFVDDMSAIGQSLDKAQ
DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPELTDQAVNQDEEYRLRSVPEQPNDEVYQRDEEYNQQSH
>Mature_475_residues
MDISIMVYAVIALVSVAIGWLIASYQHAQQKAEQFAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLE
ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQESF
GKEAQERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDTRSRMQ
PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYARESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA
FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQKIADRASKLYDKMRLFVDDMSAIGQSLDKAQ
DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPELTDQAVNQDEEYRLRSVPEQPNDEVYQRDEEYNQQSH

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=474, Percent_Identity=96.2025316455696, Blast_Score=937, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 54797; Mature: 54797

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISIMVYAVIALVSVAIGWLIASYQHAQQKAEQFAEREEMVAELSAAKQQITQSEHWRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQESFGKEAQERHTLAHEIRNLQQL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDTRSRMQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHCCC
PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYARESALQEHIASVRNHIRLLGRKDYQ
CCCEEECCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR
HCCCCHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHH
YEHQSRNAQKIADRASKLYDKMRLFVDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
AEAFRGLGVEIKREINPELTDQAVNQDEEYRLRSVPEQPNDEVYQRDEEYNQQSH
HHHHHCCCCHHHHHCCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHCCHHHCCCCC
>Mature Secondary Structure
MDISIMVYAVIALVSVAIGWLIASYQHAQQKAEQFAEREEMVAELSAAKQQITQSEHWRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQESFGKEAQERHTLAHEIRNLQQL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQVSIETDTRSRMQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHCCC
PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYARESALQEHIASVRNHIRLLGRKDYQ
CCCEEECCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR
HCCCCHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHH
YEHQSRNAQKIADRASKLYDKMRLFVDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
AEAFRGLGVEIKREINPELTDQAVNQDEEYRLRSVPEQPNDEVYQRDEEYNQQSH
HHHHHCCCCHHHHHCCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]