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The map label for this gene is yihI [H]

Identifier: 218550895

GI number: 218550895

Start: 3701228

End: 3701797

Strand: Reverse

Name: yihI [H]

Synonym: EFER_3611

Alternate gene names: 218550895

Gene position: 3701797-3701228 (Counterclockwise)

Preceding gene: 218550897

Following gene: 218550894

Centisome position: 80.67

GC content: 51.93

Gene sequence:

>570_bases
TTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCTTCACC
ATCACGCAGCAAAGGTCATGCAAAAGCGCGTCGCAAAACGCGCGAAGAGCTGAATCAGGAAGCTCGTGACCGCAAGCGTC
AGAAAAAACGTCGTGGCCATGCGCCGGGCAGTCGCGCAGCGGGCGGTAACACCACGTCGGGCAGCAAAGGCCAGAACGCA
CCGAAAGATCCACGTATTGGCAGTAAAACCCCTATTCCATTGGGCGTGACTGAAAAAGTCACCAAACAGCACAAACCGAA
GAGTGAGAAACCTATGCTTTCACCGCAGGCGGAGTTGGAGTTACTGGAAACGGATGAGCGTCTGGATGCGCTGCTGGAAC
GTCTGGAAGCAGGAGAAACCTTGAGCGCTGAAGAGCAATCCTGGGTTGATGCCAAACTGGATCGTATCGATGAGCTGATG
CAGAAACTCGGCCTCTCTTATGACGACGACGAAGAAGAGGAAGAAGACGAGAAGCAAGAAGACATGATGCGTCTGCTGCG
GGGCAACTAA

Upstream 100 bases:

>100_bases
AAACAGGGCGTGTTGATAGCCAACAGGGATTGTAAGGCCCGCTGAGGGTTTTGAGTCAAGAAAAAAGGCGACAGAGCAAT
CTGTCGCCTTTTTTCTTTGC

Downstream 100 bases:

>100_bases
CGGATTGCCGCCGTGGGCCTTCCCGTTCTGCTGATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACT
ACAGCGGTTGTCGCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLSVRFRRKSILNKTAKRRTIMKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNA
PKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELM
QKLGLSYDDDEEEEEDEKQEDMMRLLRGN

Sequences:

>Translated_189_residues
MLSVRFRRKSILNKTAKRRTIMKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNA
PKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELM
QKLGLSYDDDEEEEEDEKQEDMMRLLRGN
>Mature_189_residues
MLSVRFRRKSILNKTAKRRTIMKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNA
PKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELM
QKLGLSYDDDEEEEEDEKQEDMMRLLRGN

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=169, Percent_Identity=98.2248520710059, Blast_Score=273, Evalue=6e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 21512; Mature: 21512

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVRFRRKSILNKTAKRRTIMKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APGSRAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
LLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DMMRLLRGN
HHHHHHHCC
>Mature Secondary Structure
MLSVRFRRKSILNKTAKRRTIMKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APGSRAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
LLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DMMRLLRGN
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA