| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yhjW [H]
Identifier: 218550827
GI number: 218550827
Start: 3623827
End: 3625683
Strand: Reverse
Name: yhjW [H]
Synonym: EFER_3543
Alternate gene names: 218550827
Gene position: 3625683-3623827 (Counterclockwise)
Preceding gene: 218550828
Following gene: 218550826
Centisome position: 79.01
GC content: 48.52
Gene sequence:
>1857_bases TTGTGCTTCAGACACACGCTTTCCAGACACTTTTTCTTTAACCTGTGGTCTACTAGCCTGCGCTGTGGATTTCATTACTA TCGGCAACCTCCGCGTATTTCACCTGCCAGGTCACATAGATCATCACGCAGGGATTTTTCACCTGTTTTTCCAGGGTTTG TTTGCATGAGATATATCAAAACGATAACGCAGCAAAAGCTAAGCTTTTTGCTCGCTGTCTATATCGGTCTGTTTATGAAT TGCGCAGTCTATTTCCGTCGGTTTGACGGTTACGCGCATAACTTCACTTTTCTTAATGGCGTCTCGGCGGTTATCGAACT GGCAGGGACGGTTCTGGCAACCTTCTTCTTTTTACGTTTAATTTCACTCTTTGGCAGAACGGCCTGGAAAGTGCTGGCTT CATTGCTGGTGCTGATTTCTGCTGGAGCCAGCTACTATATGACATTTATGAATGTCATGATTGGCTACGGGATTGTTGCT TCGGTGATGACCACCGACATTGACCTGTCGAAAGAAGTGGTTGGCTGGACGCTTATCGCATGGGTTGTACTGGTGAGTAT TATCCCGTTGCTATTTATCTGGATGAACCGCTCACAAGACACCTTCTGGCGTCAGCTGTGTACCCCGAAAACACGCTGGC GTAGTGCGCTTACTGTACTGCTGGCGGGTTTACTGGTATGGGGCCCAATCCGTCTTATGGATATAGCACAAAAGCGTGCA GACCGCATGGCTGGGGTGGATATGCCAAGTTATGGCGGGGTGCTGGCGAACTCTTATTTACCCTCGAACTGGCTTTCTGC GCTGGGTCTGTACGCTTGGGCGCAAGTGGATGAATCGTCGGACAATCGGTCGCTGATGAATCCGGCAAAAAAATTCACCT ATACTCCGACACAAAATCTCGACGATACCTATGTGGTTTTCATTATTGGTGAAACCACGCGTTGGGATCATATGGGGATG CTGGGCTACGAGCGTGATACCACGCCGAAGCTGGCGAAAGAGAAGAACCTGGTGATGTACCGTGGTTATTCTTGCGATAC TGCGACTAAATTATCACTACGCTGTATGTTTGTGCGTGAAGGTGGAACGGAAGATAACCCACAACGTACGCTTAAAGAGC AGAACGTATTTGCGGTTCTCAAACAGTTGGGCTTTAGCTCTGATTTGTACGCCATGCAGAGTGAGATGTGGTTCTACAGC AACACCATGGCTGACAACATTGCCTATCGTGAGCAAATCGCTGCTGAGCCACGTAACCGTGGGAAAGCGGTGGACGACAT GTTGCTGGTCAATGAAATCGAGCGTTCTCTGGAGAAAAAGCCAGAAGGTAAGCATCTGATTGTCTTACATACCAAAGGGT CGCACTACAACTATACGCAGCGTTATCCGCGTGAGTTTGCCCAGTGGCAGCCAGAGTGCTATGCAATTGATCGCAAATGC CCACGAGCGCCGATGATTAACTCATACGATAACTCGATCACCTACGTTGATCATTTTATCGATACAGTGATCGACAAATT CCGCGATAAGAAGGCCATTATTTTCTATGCAGCGGACCACGGTGAGTCAATTAACGAGCGTGAGCACTTGCATGGTACAC CACGTGAATATGCGCCACCGGAGCAGTTCCGCGTACCGATGATGGTCTGGATGTCGGATAAATATCTGGAGAATCCGGCC AACGCGCAGGCATTTGCGCAACTGAAAAAAGAGGCGGATATCAAAGTGCCACGCCGTCATGTGGAACTGTACGACACCAT TTTAGGTTGCCTTGGTTATACTTCACCGGACGGTGGTATCAACGAAAACAACAACTGGTGTCGAATCCCTCAGGCGAAGA AAGCAGAAGCTAACTAA
Upstream 100 bases:
>100_bases CACTTGAATATTTACCATCAATTGCAAGTCAGGTGACCCCCACATTTTTAACGGCCTCACTAAACCATAAGTCTCAATTC ATACTTGCGCTTTTGTAAAT
Downstream 100 bases:
>100_bases ATGCACTGCTGAGTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATG CGCCCCGCATTCGGTGATTG
Product: phosphoethanolamine transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MCFRHTLSRHFFFNLWSTSLRCGFHYYRQPPRISPARSHRSSRRDFSPVFPGFVCMRYIKTITQQKLSFLLAVYIGLFMN CAVYFRRFDGYAHNFTFLNGVSAVIELAGTVLATFFFLRLISLFGRTAWKVLASLLVLISAGASYYMTFMNVMIGYGIVA SVMTTDIDLSKEVVGWTLIAWVVLVSIIPLLFIWMNRSQDTFWRQLCTPKTRWRSALTVLLAGLLVWGPIRLMDIAQKRA DRMAGVDMPSYGGVLANSYLPSNWLSALGLYAWAQVDESSDNRSLMNPAKKFTYTPTQNLDDTYVVFIIGETTRWDHMGM LGYERDTTPKLAKEKNLVMYRGYSCDTATKLSLRCMFVREGGTEDNPQRTLKEQNVFAVLKQLGFSSDLYAMQSEMWFYS NTMADNIAYREQIAAEPRNRGKAVDDMLLVNEIERSLEKKPEGKHLIVLHTKGSHYNYTQRYPREFAQWQPECYAIDRKC PRAPMINSYDNSITYVDHFIDTVIDKFRDKKAIIFYAADHGESINEREHLHGTPREYAPPEQFRVPMMVWMSDKYLENPA NAQAFAQLKKEADIKVPRRHVELYDTILGCLGYTSPDGGINENNNWCRIPQAKKAEAN
Sequences:
>Translated_618_residues MCFRHTLSRHFFFNLWSTSLRCGFHYYRQPPRISPARSHRSSRRDFSPVFPGFVCMRYIKTITQQKLSFLLAVYIGLFMN CAVYFRRFDGYAHNFTFLNGVSAVIELAGTVLATFFFLRLISLFGRTAWKVLASLLVLISAGASYYMTFMNVMIGYGIVA SVMTTDIDLSKEVVGWTLIAWVVLVSIIPLLFIWMNRSQDTFWRQLCTPKTRWRSALTVLLAGLLVWGPIRLMDIAQKRA DRMAGVDMPSYGGVLANSYLPSNWLSALGLYAWAQVDESSDNRSLMNPAKKFTYTPTQNLDDTYVVFIIGETTRWDHMGM LGYERDTTPKLAKEKNLVMYRGYSCDTATKLSLRCMFVREGGTEDNPQRTLKEQNVFAVLKQLGFSSDLYAMQSEMWFYS NTMADNIAYREQIAAEPRNRGKAVDDMLLVNEIERSLEKKPEGKHLIVLHTKGSHYNYTQRYPREFAQWQPECYAIDRKC PRAPMINSYDNSITYVDHFIDTVIDKFRDKKAIIFYAADHGESINEREHLHGTPREYAPPEQFRVPMMVWMSDKYLENPA NAQAFAQLKKEADIKVPRRHVELYDTILGCLGYTSPDGGINENNNWCRIPQAKKAEAN >Mature_618_residues MCFRHTLSRHFFFNLWSTSLRCGFHYYRQPPRISPARSHRSSRRDFSPVFPGFVCMRYIKTITQQKLSFLLAVYIGLFMN CAVYFRRFDGYAHNFTFLNGVSAVIELAGTVLATFFFLRLISLFGRTAWKVLASLLVLISAGASYYMTFMNVMIGYGIVA SVMTTDIDLSKEVVGWTLIAWVVLVSIIPLLFIWMNRSQDTFWRQLCTPKTRWRSALTVLLAGLLVWGPIRLMDIAQKRA DRMAGVDMPSYGGVLANSYLPSNWLSALGLYAWAQVDESSDNRSLMNPAKKFTYTPTQNLDDTYVVFIIGETTRWDHMGM LGYERDTTPKLAKEKNLVMYRGYSCDTATKLSLRCMFVREGGTEDNPQRTLKEQNVFAVLKQLGFSSDLYAMQSEMWFYS NTMADNIAYREQIAAEPRNRGKAVDDMLLVNEIERSLEKKPEGKHLIVLHTKGSHYNYTQRYPREFAQWQPECYAIDRKC PRAPMINSYDNSITYVDHFIDTVIDKFRDKKAIIFYAADHGESINEREHLHGTPREYAPPEQFRVPMMVWMSDKYLENPA NAQAFAQLKKEADIKVPRRHVELYDTILGCLGYTSPDGGINENNNWCRIPQAKKAEAN
Specific function: Catalyzes the addition of a phosphoethanolamine (pEtN) moiety to the outer 3-deoxy-D-manno-octulosonic acid (KDO) residue of a KDO(2)-lipid A. Phosphatidylethanolamines with one unsaturated acyl group functions as pEtN donors and the reaction releases dia
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptB subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082286, Length=563, Percent_Identity=79.7513321492007, Blast_Score=947, Evalue=0.0, Organism=Escherichia coli, GI87082372, Length=542, Percent_Identity=23.9852398523985, Blast_Score=132, Evalue=8e-32, Organism=Escherichia coli, GI87082223, Length=402, Percent_Identity=26.865671641791, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1790392, Length=507, Percent_Identity=21.301775147929, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 71249; Mature: 71249
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCFRHTLSRHFFFNLWSTSLRCGFHYYRQPPRISPARSHRSSRRDFSPVFPGFVCMRYIK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHH TITQQKLSFLLAVYIGLFMNCAVYFRRFDGYAHNFTFLNGVSAVIELAGTVLATFFFLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ISLFGRTAWKVLASLLVLISAGASYYMTFMNVMIGYGIVASVMTTDIDLSKEVVGWTLIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH WVVLVSIIPLLFIWMNRSQDTFWRQLCTPKTRWRSALTVLLAGLLVWGPIRLMDIAQKRA HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRMAGVDMPSYGGVLANSYLPSNWLSALGLYAWAQVDESSDNRSLMNPAKKFTYTPTQNL HHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHCCCCCCCCC DDTYVVFIIGETTRWDHMGMLGYERDTTPKLAKEKNLVMYRGYSCDTATKLSLRCMFVRE CCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEEEEEEC GGTEDNPQRTLKEQNVFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIAAEPRNR CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC GKAVDDMLLVNEIERSLEKKPEGKHLIVLHTKGSHYNYTQRYPREFAQWQPECYAIDRKC CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCC PRAPMINSYDNSITYVDHFIDTVIDKFRDKKAIIFYAADHGESINEREHLHGTPREYAPP CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCH EQFRVPMMVWMSDKYLENPANAQAFAQLKKEADIKVPRRHVELYDTILGCLGYTSPDGGI HHCCCCHHEEECHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC NENNNWCRIPQAKKAEAN CCCCCEEECCCCCCCCCC >Mature Secondary Structure MCFRHTLSRHFFFNLWSTSLRCGFHYYRQPPRISPARSHRSSRRDFSPVFPGFVCMRYIK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHH TITQQKLSFLLAVYIGLFMNCAVYFRRFDGYAHNFTFLNGVSAVIELAGTVLATFFFLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ISLFGRTAWKVLASLLVLISAGASYYMTFMNVMIGYGIVASVMTTDIDLSKEVVGWTLIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH WVVLVSIIPLLFIWMNRSQDTFWRQLCTPKTRWRSALTVLLAGLLVWGPIRLMDIAQKRA HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRMAGVDMPSYGGVLANSYLPSNWLSALGLYAWAQVDESSDNRSLMNPAKKFTYTPTQNL HHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHCCCCCCCCC DDTYVVFIIGETTRWDHMGMLGYERDTTPKLAKEKNLVMYRGYSCDTATKLSLRCMFVRE CCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEEEEEEC GGTEDNPQRTLKEQNVFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIAAEPRNR CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC GKAVDDMLLVNEIERSLEKKPEGKHLIVLHTKGSHYNYTQRYPREFAQWQPECYAIDRKC CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCC PRAPMINSYDNSITYVDHFIDTVIDKFRDKKAIIFYAADHGESINEREHLHGTPREYAPP CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCH EQFRVPMMVWMSDKYLENPANAQAFAQLKKEADIKVPRRHVELYDTILGCLGYTSPDGGI HHCCCCHHEEECHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC NENNNWCRIPQAKKAEAN CCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 9298646 [H]