| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550744
Identifier: 218550744
GI number: 218550744
Start: 3520685
End: 3521266
Strand: Direct
Name: 218550744
Synonym: EFER_3455
Alternate gene names: NA
Gene position: 3520685-3521266 (Clockwise)
Preceding gene: 218550743
Following gene: 218550745
Centisome position: 76.72
GC content: 55.67
Gene sequence:
>582_bases ATGTCGGGCATTCGCTCGCTACCGATGATTAAGCTGCTGACTGGATTATTGCTGCTCGCCTGGCCGTTTGTGATTTGGTT TGGCTTAGCGCATAACGGCCTGCACTGGTTGTTGCCGCTGATGGCGCTGCTGTTTTTGTTGCGCTTGCGCCAGACCCGTC GCCAGACCGGGCCACTACAAGCCGTCACGCAAATCGTCGCTGTCGTAGGCATCGCCTTGTGTGCCGCCAGCTTTCTGCTG AAAACGCACCAGCTACTGCTGTTTTACCCGGCAGTGGTTAACGCGGTCATGCTGGCGGTTTTTGGCGGTTCGCTGTGGTC GGCAATGCCAATTGTTGAGCGGCTGGCACGTTTGCAGGAGCCAGATCTCCCGGAAAAGGGCGTGCGCTATACCCGCCACG TCACGCAAATCTGGTGCGGCTTTTTCATCATCAACGGCGGAATTGCCCTCTTTACCGCGCTGCATGGCGATATGTCGTTA TGGACTGCCTGGAACGGCATGATTGCTTATTTGTTAATGGGAACGTTAATGGCTGGTGAATGGCTGGTGCGCCGTCAGGT GATGAAAAGAGATCGCTCATGA
Upstream 100 bases:
>100_bases AAAACCGGTAAGAAAATCAAGCCGGAAGAGTTTAAAGCAGTGCGTACAGTCCAGGATGTCGTCGAGGCTGTAGAACGCCT GCTACAAGAAGCCTGATCTG
Downstream 100 bases:
>100_bases AGCAGACCTTACCGCTTGCACGCTGGCTGACTGCGCCACGCCCTGATGACACGCCCATTGCGTGGCTGGACGAAAGCACC TGGACGCTGAGCGATTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSGIRSLPMIKLLTGLLLLAWPFVIWFGLAHNGLHWLLPLMALLFLLRLRQTRRQTGPLQAVTQIVAVVGIALCAASFLL KTHQLLLFYPAVVNAVMLAVFGGSLWSAMPIVERLARLQEPDLPEKGVRYTRHVTQIWCGFFIINGGIALFTALHGDMSL WTAWNGMIAYLLMGTLMAGEWLVRRQVMKRDRS
Sequences:
>Translated_193_residues MSGIRSLPMIKLLTGLLLLAWPFVIWFGLAHNGLHWLLPLMALLFLLRLRQTRRQTGPLQAVTQIVAVVGIALCAASFLL KTHQLLLFYPAVVNAVMLAVFGGSLWSAMPIVERLARLQEPDLPEKGVRYTRHVTQIWCGFFIINGGIALFTALHGDMSL WTAWNGMIAYLLMGTLMAGEWLVRRQVMKRDRS >Mature_192_residues SGIRSLPMIKLLTGLLLLAWPFVIWFGLAHNGLHWLLPLMALLFLLRLRQTRRQTGPLQAVTQIVAVVGIALCAASFLLK THQLLLFYPAVVNAVMLAVFGGSLWSAMPIVERLARLQEPDLPEKGVRYTRHVTQIWCGFFIINGGIALFTALHGDMSLW TAWNGMIAYLLMGTLMAGEWLVRRQVMKRDRS
Specific function: Unknown
COG id: COG4648
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21709; Mature: 21577
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIRSLPMIKLLTGLLLLAWPFVIWFGLAHNGLHWLLPLMALLFLLRLRQTRRQTGPLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH AVTQIVAVVGIALCAASFLLKTHQLLLFYPAVVNAVMLAVFGGSLWSAMPIVERLARLQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDLPEKGVRYTRHVTQIWCGFFIINGGIALFTALHGDMSLWTAWNGMIAYLLMGTLMAGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH WLVRRQVMKRDRS HHHHHHHHHHCCC >Mature Secondary Structure SGIRSLPMIKLLTGLLLLAWPFVIWFGLAHNGLHWLLPLMALLFLLRLRQTRRQTGPLQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH AVTQIVAVVGIALCAASFLLKTHQLLLFYPAVVNAVMLAVFGGSLWSAMPIVERLARLQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDLPEKGVRYTRHVTQIWCGFFIINGGIALFTALHGDMSLWTAWNGMIAYLLMGTLMAGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH WLVRRQVMKRDRS HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA