Click here to switch to the map view.

The map label for this gene is yhhL [H]

Identifier: 218550728

GI number: 218550728

Start: 3508044

End: 3508436

Strand: Direct

Name: yhhL [H]

Synonym: EFER_3439

Alternate gene names: 218550728

Gene position: 3508044-3508436 (Clockwise)

Preceding gene: 218550727

Following gene: 218550730

Centisome position: 76.45

GC content: 48.09

Gene sequence:

>393_bases
ATGTCGAAAGCGAAGTCGAAAACGGGCTACCCACCGTTCCGGCGAACTGGTCATTACATCGGGAAAAAGTGGCAGGTCAG
GTGGCTTACCGCCTGTATCAACGCGAAGCACAAGGAGAAAGTGATGTTGATTAATATTGGACGTTTGTTAATGCTCTGCG
TTTGGGGATTTTTAATCCTCAACCTGGTGCATCCCTTCCCGCGTCCGCTGAATATTTTCGTTAACGTGGCGCTGATTTTT
ACCGTGCTGATGCATGGTATGCAGCTGGCGCTGTTGAAATCCACTTTACCGAAAGATGGCCCGCAGATGACCACCGCCGA
AAAGGTGCGCATTTTCCTTTTCGGCGTGTTTGAACTGCTGGTCTGGCAGAAGAAATTTAACGTTAAAAAATAA

Upstream 100 bases:

>100_bases
AATATCGTTTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCT
GGCTGACGAAGCCCTGATTT

Downstream 100 bases:

>100_bases
CCTTATTGTTTGCTGACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCATG
GTACTGCTGGGCGTCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSKAKSKTGYPPFRRTGHYIGKKWQVRWLTACINAKHKEKVMLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIF
TVLMHGMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFNVKK

Sequences:

>Translated_130_residues
MSKAKSKTGYPPFRRTGHYIGKKWQVRWLTACINAKHKEKVMLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIF
TVLMHGMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFNVKK
>Mature_129_residues
SKAKSKTGYPPFRRTGHYIGKKWQVRWLTACINAKHKEKVMLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFT
VLMHGMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFNVKK

Specific function: Unknown

COG id: COG3776

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789876, Length=89, Percent_Identity=97.752808988764, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009525 [H]

Pfam domain/function: PF06611 DUF1145 [H]

EC number: NA

Molecular weight: Translated: 15080; Mature: 14948

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAKSKTGYPPFRRTGHYIGKKWQVRWLTACINAKHKEKVMLINIGRLLMLCVWGFLIL
CCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
NLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VWQKKFNVKK
HHHHHCCCCC
>Mature Secondary Structure 
SKAKSKTGYPPFRRTGHYIGKKWQVRWLTACINAKHKEKVMLINIGRLLMLCVWGFLIL
CCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
NLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VWQKKFNVKK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503 [H]