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The map label for this gene is yhgF [H]

Identifier: 218550665

GI number: 218550665

Start: 3432496

End: 3434817

Strand: Direct

Name: yhgF [H]

Synonym: EFER_3375

Alternate gene names: 218550665

Gene position: 3432496-3434817 (Clockwise)

Preceding gene: 218550664

Following gene: 218550666

Centisome position: 74.8

GC content: 56.55

Gene sequence:

>2322_bases
ATGATGAATGATTCGTTCTGCCGCATTATTGCGGGTGAAATTCAGGCGCGCCCGGAACAGGTTGACGCTGCCGTTCGCCT
GCTTGACGAAGGGAATACCGTGCCGTTTATCGCACGTTATCGTAAGGAAATCACCGGCGGTCTGGATGACACGCAGCTGC
GTAATCTGGAAACGCGTCTGAGCTATTTGCGCGAACTGGAAGAGAGACGTCAGGCGATCCTCAAGTCCATTTCCGAGCAA
GGCAAGCTCACTGACGAGCTGGCGAATGCCATCAACGCCACACTAAGCAAAACCGAACTCGAAGACCTCTACCTGCCCTA
CAAACCTAAACGCCGCACCCGCGGGCAAATCGCCATTGAAGCAGGGCTTGAGCCGTTGGCCGACCTACTGTGGAACGATC
CGTCGCACACGCCAGAAGTCGCCGCTGCACAATATGTTGATGCCGATAAAGGCGTAGCAGATACCAAAGCCGCGCTGGAC
GGCGCGCGCTATATCCTGATGGAACGGTTTGCCGAAGATGCCGCGCTGCTGGCGAAAGTGCGTGATTATCTGTGGAAGAA
CGCGCATTTGGTTTCTACGGTGGTGAACGGTAAAGAAGAGGAAGGGGCGAAATTCCGCGACTATTTCGATCATCACGAAC
CGCTGTCAACGGTGCCTTCTCACCGCGCGCTGGCGATGTTCCGTGGGCGTAACGAAGGCGTGCTCCAGCTTTCGCTAAAT
GCCGATCCGCAGTTCGACGAACCGCCAAAAGAGAGCTACTGCGAGCAAATCATCATGGATCACCTCAGTCTGCGCCTGAA
CAATGCCCCGGTGGATAGCTGGCGCAAAGGCGTAGTGAGCTGGACCTGGCGCATCAAGGTGCTGATGCACCTGGAAACCG
AACTGATGGGCACAGTGCGTGAACGCGCGGAAGATGAAGCAATCAACGTCTTTGCCCGTAACCTACACGATCTTCTGATG
GCGGCCCCTGCCGGACTGCGTGCAACGATGGGCCTCGATCCGGGTCTGCGTACTGGGGTAAAAGTAGCGGTAGTCGATGC
GACGGGTAAACTGGTGGCGACCGACACCATTTACCCGCACACCGGACAAGCCGCAAAAGCAGCGATGACCGTTGCTGCCC
TGTGTGAAAAACATAACGTTGAACTGGTGGCAATCGGTAACGGTACGGCTTCCCGCGAAACCGAGCGTTTCTATCTCGAC
GTTCAGAAGCAGTTTCCGAAAGTGACCGCACAGAAAGTGATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGA
ACTGGCGGCGCAGGAGTTCCCGGATCTCGATGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGTCGTTTGCAGGATCCGC
TGGCGGAGTTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCC
CGCAAACTGGATGCAGTAGTAGAAGACTGCGTAAACGCCGTTGGCGTCGATCTCAACACCGCTTCCGTTCCGCTGTTAAC
CCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTGGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTC
AGCAACTGCTGAAAGTCAGCCGTGTGGGGCCGAAAGCCTTCGAGCAGTGCGCGGGCTTCCTGCGGATTAACAACGGCGAT
AACCCGCTGGACGCCTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACT
GAAAGATCTGATGGGTAACAGCAGCGAGCTGCGTAACCTGAAAGCGTCTGACTTTACTGATGAGAAATTCGGTGTGCCGA
CAGTAACTGACATCATCAAAGAGCTGGAAAAACCAGGTCGCGATCCGCGTCCGGAATTTAAAACCGCCCAGTTTGCCGAT
GGCGTCGAGACAATGAACGACCTGCAACCGGGGATGATCCTCGAAGGTGCGGTGACCAACGTCACCAACTTTGGCGCGTT
TGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCG
TGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGT
CTGGACGAGCAGCCTGGCGAAACCAACGCCCGTCGCAGCGGCGGTAATGAACGTTCACAAAACAACCGCCCGGCAGCCAA
ACCACGCGGTCGTGAAGCGCAGCCTACCGGTAACAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTT
AA

Upstream 100 bases:

>100_bases
GTAAGGAAGAGTCTTAACCTCCTGCCGATGGCTGGCATTTTTGCCAGCCAGTCCGTATAACTATCCCCTGATTTTTGATC
CGAAAAGATGAACTCAAACC

Downstream 100 bases:

>100_bases
ACGCCCTGATTAGCCCCTAAACCTGCGCGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTAACGAGACATAAAAG
TGCCGGAGAATATCTCCGGC

Product: transcriptional accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQ
GKLTDELANAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNDPSHTPEVAAAQYVDADKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVNGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIIMDHLSLRLNNAPVDSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRVGPKAFEQCAGFLRINNGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNARRSGGNERSQNNRPAAKPRGREAQPTGNSAMMDALAAAMGKKR

Sequences:

>Translated_773_residues
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQ
GKLTDELANAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNDPSHTPEVAAAQYVDADKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVNGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIIMDHLSLRLNNAPVDSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRVGPKAFEQCAGFLRINNGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNARRSGGNERSQNNRPAAKPRGREAQPTGNSAMMDALAAAMGKKR
>Mature_773_residues
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQ
GKLTDELANAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNDPSHTPEVAAAQYVDADKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVNGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIIMDHLSLRLNNAPVDSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRVGPKAFEQCAGFLRINNGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNARRSGGNERSQNNRPAAKPRGREAQPTGNSAMMDALAAAMGKKR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=803, Percent_Identity=34.2465753424658, Blast_Score=408, Evalue=1e-113,
Organism=Homo sapiens, GI27597090, Length=399, Percent_Identity=25.5639097744361, Blast_Score=96, Evalue=1e-19,
Organism=Escherichia coli, GI87082262, Length=773, Percent_Identity=98.4476067270375, Blast_Score=1565, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=89, Percent_Identity=42.6966292134831, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=715, Percent_Identity=27.2727272727273, Blast_Score=217, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17552892, Length=294, Percent_Identity=28.2312925170068, Blast_Score=87, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=229, Percent_Identity=26.2008733624454, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI62484314, Length=779, Percent_Identity=31.9640564826701, Blast_Score=365, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24640080, Length=451, Percent_Identity=23.059866962306, Blast_Score=96, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85198; Mature: 85198

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
SYLRELEERRQAILKSISEQGKLTDELANAINATLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWNDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVSTVVNGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
HHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCHHHHHHCCCCCCEEEEEEC
ADPQFDEPPKESYCEQIIMDHLSLRLNNAPVDSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHH
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHEEEHHHHCCHHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RVGPKAFEQCAGFLRINNGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL
HCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHH
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEEECCCCEEEEEEE
LDEQPGETNARRSGGNERSQNNRPAAKPRGREAQPTGNSAMMDALAAAMGKKR
ECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
SYLRELEERRQAILKSISEQGKLTDELANAINATLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWNDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVSTVVNGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
HHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCHHHHHHCCCCCCEEEEEEC
ADPQFDEPPKESYCEQIIMDHLSLRLNNAPVDSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHH
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHEEEHHHHCCHHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RVGPKAFEQCAGFLRINNGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL
HCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHH
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEEECCCCEEEEEEE
LDEQPGETNARRSGGNERSQNNRPAAKPRGREAQPTGNSAMMDALAAAMGKKR
ECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]