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The map label for this gene is prkB [H]

Identifier: 218550618

GI number: 218550618

Start: 3385474

End: 3386343

Strand: Direct

Name: prkB [H]

Synonym: EFER_3328

Alternate gene names: 218550618

Gene position: 3385474-3386343 (Clockwise)

Preceding gene: 218550616

Following gene: 218550620

Centisome position: 73.78

GC content: 52.18

Gene sequence:

>870_bases
ATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGTCTCGCATTTCGTAA
AATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACGCGCCCGGAAATGGACA
TGGCGATCCGCAAGGCGCGTGATGCCGGGCGGCATATCAGCTACTTTGGCCCCGAAGCTAACGACTTCGGCCTGCTGGAA
CAAACCTTCATTGAATACGGTCAGAGCGGCAAAGGAAAATCACGCAAATATCTGCATACGTACGACGAAGCCGTACCATG
GAATCAGGTGCCGGGGACATTCACCCCATGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGGCTACACG
GCGGCGTGGTCACACCACATCATAACGTTGCGCAGCATGTGGATTTACTGGTCGGCGTAGTGCCTATCGTTAACCTTGAG
TGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCGGTGATGGACTCAGTAGTACGTTCAAT
GGAAGACTATATCAACTACATCACGCCGCAGTTTTCCCGCACCCATCTTAACTTCCAGCGCGTTCCCACTGTCGACACCT
CAAACCCGTTCGCAGCAAAGGGCATTCCATCACTGGATGAAAGCTTTGTGGTGATCCATTTTCGTAATCTGGAAGGGATC
GATTTCCCCTGGCTGCTGGCGATGTTGCAGGGCTCATTCATTTCCCACATCAATACATTAGTGGTGCCGGGCGGTAAAAT
GGGTCTGGCAATGGAGTTAATTATGCTGCCACTGGTGCAACGATTGATGGAAGGAAAGAAAATCGAGTAA

Upstream 100 bases:

>100_bases
TGCACGAAACGGTCAATATCATGCCGCGCAGTCAGTTTCGCGAATAACCTGCAGCCGTCGGCGGACGAGATAATAATGAT
AGCTAAGTCATGGAGTTACT

Downstream 100 bases:

>100_bases
CTCTGCTAATATGCCGGATAAACAATTATCCGGCATCGTACTCCTGACATTAAATCACGCGGCAACCACTTCATACGAGT
GAGTAATATTCACCGCTTTT

Product: phosphoribulokinase

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLE
QTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPHHNVAQHVDLLVGVVPIVNLE
WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGI
DFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE

Sequences:

>Translated_289_residues
MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLE
QTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPHHNVAQHVDLLVGVVPIVNLE
WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGI
DFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE
>Mature_288_residues
SAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQ
TFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPHHNVAQHVDLLVGVVPIVNLEW
IQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGID
FPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=289, Percent_Identity=99.6539792387543, Blast_Score=597, Evalue=1e-172,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 32353; Mature: 32222

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00567 PHOSPHORIBULOKINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKAR
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCHHHHHHHHHH
DAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPL
HCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
PEPTDVLFYEGLHGGVVTPHHNVAQHVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVM
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
DSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGI
HHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE
CHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKAR
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCHHHHHHHHHH
DAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPL
HCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
PEPTDVLFYEGLHGGVVTPHHNVAQHVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVM
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
DSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGI
HHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE
CHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1756168; 7940673; 7984428; 7920643 [H]