| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yheT [H]
Identifier: 218550615
GI number: 218550615
Start: 3384186
End: 3385208
Strand: Direct
Name: yheT [H]
Synonym: EFER_3325
Alternate gene names: 218550615
Gene position: 3384186-3385208 (Clockwise)
Preceding gene: 218550614
Following gene: 218550616
Centisome position: 73.75
GC content: 53.08
Gene sequence:
>1023_bases ATGGCGCAGATAACGACGACCGATGCCAATGAATTCAGCAGCAGTGCTGAATTCACCCCTATGCGCGGCTTTAGCAATTG TCATCTGCAAACCATGCTGCCGCGTCTGTTTCGTCGCAAGGTGAAATTCACCCCGCACTGGCAGCGACTGGAGTTGCCCG ACGGCGATTTTGTCGATCTCGCATGGAGTGAAGACCCTGCCCAGGCGAACCATAAACCGCGTTTAGTGGTGTTTCACGGG CTGGAGGGCAGCCTCAATAGCCCTTACGCCCACGGTCTGGTCGAGGCGGCGCAAAAACGCGGCTGGCTGGGCGTGGTGAT GCATTTTCGCGGATGCAGCGGTGAACCAAACCGTATGCACCGCATTTACCATTCGGGCGAAACCGAAGACGCCAGCTGGT TTTTACGCTGGCTGCAGCGCGAATTTGGACATGCGCCAACGGCTGCCGTCGGCTATTCGCTCGGCGGTAATATGCTCGCC TGTTTGCTGGCAAAAGAAGGTAATAACCTCCCGATTGATGCAGCGGTAATTGTCTCCGCGCCATTTATGCTGGAAGCCTG TAGTTATCATATGGAAAAGGGCTTTTCCCGCGTTTATCAGCGTTACTTGCTGAACCTGTTAAAAGCCAATGCTGCGCGCA AACTGTCAGCCTATCCCGGTACGCTGCCGATTAATCTCGCACAGTTAAAATCGGTACGTCGCATCCGTGAATTTGACGAT CTGATCACCGCCAGAATTCACGGCTACGCTGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCA GATCGCCAAACCGACACTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAATC TCCCCCCGCAGGTGGAGTATCAACTGACTGAACATGGTGGTCATGTTGGCTTTCTTGGCGGTACATTATTTCATCCGCAA ATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGAAATCATGTTGA
Upstream 100 bases:
>100_bases AGCAAGCCAGCGCCAAATCCGGCCTGGAAGAGTGCGAAATGGCGTGGCTGGAAGCCCAGGAGCAGCTTGAGCAGATGCTG CTGGAAGGCCAAAGCAACTG
Downstream 100 bases:
>100_bases TTCCGTGGCAAGAACTCTCCCCCGAAACGCTGGAAAATTTAATTGAAAGTTTTGTGTTACGCGAAGGCACCGATTATGGT GAACATGAGCGTACACTTGA
Product: hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRKVKFTPHWQRLELPDGDFVDLAWSEDPAQANHKPRLVVFHG LEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA CLLAKEGNNLPIDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLSAYPGTLPINLAQLKSVRRIREFDD LITARIHGYADAIDYYRQCSAMPMLNQIAKPTLIIHAKDDPFMDHQVIPKPENLPPQVEYQLTEHGGHVGFLGGTLFHPQ MWLESRIPDWLTTYLEAKSC
Sequences:
>Translated_340_residues MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRKVKFTPHWQRLELPDGDFVDLAWSEDPAQANHKPRLVVFHG LEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA CLLAKEGNNLPIDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLSAYPGTLPINLAQLKSVRRIREFDD LITARIHGYADAIDYYRQCSAMPMLNQIAKPTLIIHAKDDPFMDHQVIPKPENLPPQVEYQLTEHGGHVGFLGGTLFHPQ MWLESRIPDWLTTYLEAKSC >Mature_339_residues AQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRKVKFTPHWQRLELPDGDFVDLAWSEDPAQANHKPRLVVFHGL EGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLAC LLAKEGNNLPIDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLSAYPGTLPINLAQLKSVRRIREFDDL ITARIHGYADAIDYYRQCSAMPMLNQIAKPTLIIHAKDDPFMDHQVIPKPENLPPQVEYQLTEHGGHVGFLGGTLFHPQM WLESRIPDWLTTYLEAKSC
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=292, Percent_Identity=27.7397260273973, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI194578891, Length=321, Percent_Identity=28.0373831775701, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI23397659, Length=275, Percent_Identity=24, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI23397661, Length=275, Percent_Identity=24, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI269315865, Length=314, Percent_Identity=26.7515923566879, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1789752, Length=340, Percent_Identity=96.4705882352941, Blast_Score=695, Evalue=0.0, Organism=Caenorhabditis elegans, GI17566110, Length=306, Percent_Identity=25.8169934640523, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71985405, Length=287, Percent_Identity=24.7386759581882, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71985413, Length=154, Percent_Identity=27.9220779220779, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6325162, Length=289, Percent_Identity=32.1799307958478, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6319655, Length=290, Percent_Identity=27.2413793103448, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323866, Length=303, Percent_Identity=27.0627062706271, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI281398151, Length=295, Percent_Identity=31.5254237288136, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24652003, Length=295, Percent_Identity=31.5254237288136, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24581365, Length=326, Percent_Identity=24.5398773006135, Blast_Score=82, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 38507; Mature: 38375
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRKVKFTPHWQRLELPDGDFVDL CCEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEE AWSEDPAQANHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMH EECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHH RIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNNLPIDAAVIVSA HHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHCC PFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLSAYPGTLPINLAQLKSVRRIREFDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LITARIHGYADAIDYYRQCSAMPMLNQIAKPTLIIHAKDDPFMDHQVIPKPENLPPQVEY HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE QLTEHGGHVGFLGGTLFHPQMWLESRIPDWLTTYLEAKSC EEECCCCEEEEECCHHHCHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure AQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRKVKFTPHWQRLELPDGDFVDL CEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEE AWSEDPAQANHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMH EECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHH RIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNNLPIDAAVIVSA HHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHCC PFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLSAYPGTLPINLAQLKSVRRIREFDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LITARIHGYADAIDYYRQCSAMPMLNQIAKPTLIIHAKDDPFMDHQVIPKPENLPPQVEY HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE QLTEHGGHVGFLGGTLFHPQMWLESRIPDWLTTYLEAKSC EEECCCCEEEEECCHHHCHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]