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The map label for this gene is yrdA [H]

Identifier: 218550556

GI number: 218550556

Start: 3345001

End: 3345882

Strand: Direct

Name: yrdA [H]

Synonym: EFER_3264

Alternate gene names: 218550556

Gene position: 3345001-3345882 (Clockwise)

Preceding gene: 218550555

Following gene: 218550562

Centisome position: 72.9

GC content: 45.24

Gene sequence:

>882_bases
TTGCGACGCGGCTTTCAGCTCACTGTCGCGAGGTGGCGTATATTACGCTTTCCTCTTTCAGAGTCAACCCTGAATTTCAG
GATTTTTTCTCTTCGTTGTTCCGACCATCTTGTGAAGTGTTTCACATTGTCGTCTCAACGGAGGCGCATTATAGGGATCC
CATTTTTTTGCACAAGTACTTTTTTGATCTTTTTTTCTGTTTGTTGTTTTTTCACCCTTTTTGCTGCATTCGCACACAAA
ACGGTGCTTTTTTGCATACTAAAAGACTTGCACAAGGCCAATAATGCACCCAAAGTCATTAGTAAATCATTTATTGTTGA
GGTAAGTATGTCTGATGTTTTACGCCCATACCGCGATCTTTTTCCACAAATCGGTCAGCGCGTAATGATCGACGATAGTA
GTGTAGTGATCGGTGACGTTCGTTTGGCTGATGATGTGGGGATCTGGCCACTCGTTGTGATTCGTGGTGATGTACATTAT
GTACAGATTGGAGCACGCACCAATATCCAGGATGGCAGTATGTTGCATGTCACCCATAAGTCCTCATACAACCCAGATGG
CAACCCATTAACCATTGGCGAAGATGTCACTGTTGGTCATAAGGTGATGCTCCACGGCTGTACCATTGGCAATCGAGTGT
TGGTTGGGATGGCATCAATTTTACTTGATGGTGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGCCTGGTCCCA
CAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCATTAAGTGATGAAGAGAA
GGCCGGGTTACGCTATTCCGCGAATAACTACGTGAAATGGAAGGACGAGTATCTGGATCAGGGTAACCAAACCCAACCTT
GA

Upstream 100 bases:

>100_bases
TTCACTCTTGAGACTTGGTATTCATTTTTCGTCTTGCGACGTTAAGAATCCGTATCTTCGAGTGCCCACACAGATTGTCT
GATAAATTGTTAAAGAGCAG

Downstream 100 bases:

>100_bases
TCATCTTCGCTTTGATCCTGAATCAAGCTTTCTGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCA
CTGTTCTGGCGTATCTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRRGFQLTVARWRILRFPLSESTLNFRIFSLRCSDHLVKCFTLSSQRRRIIGIPFFCTSTFLIFFSVCCFFTLFAAFAHK
TVLFCILKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHY
VQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMASILLDGAIVEDDVMIGAGSLVP
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP

Sequences:

>Translated_293_residues
MRRGFQLTVARWRILRFPLSESTLNFRIFSLRCSDHLVKCFTLSSQRRRIIGIPFFCTSTFLIFFSVCCFFTLFAAFAHK
TVLFCILKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHY
VQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMASILLDGAIVEDDVMIGAGSLVP
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP
>Mature_293_residues
MRRGFQLTVARWRILRFPLSESTLNFRIFSLRCSDHLVKCFTLSSQRRRIIGIPFFCTSTFLIFFSVCCFFTLFAAFAHK
TVLFCILKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHY
VQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMASILLDGAIVEDDVMIGAGSLVP
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=184, Percent_Identity=99.4565217391304, Blast_Score=378, Evalue=1e-106,
Organism=Escherichia coli, GI1787667, Length=158, Percent_Identity=32.2784810126582, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87081681, Length=177, Percent_Identity=32.2033898305085, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32948; Mature: 32948

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGFQLTVARWRILRFPLSESTLNFRIFSLRCSDHLVKCFTLSSQRRRIIGIPFFCTST
CCCCEEEEHEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEECCHHHHHH
FLIFFSVCCFFTLFAAFAHKTVLFCILKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEECHHHHHHHHHHH
FPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK
HHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEC
SSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMASILLDGAIVEDDVMIGAGSLVP
CCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCEEEECCCCCC
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP
CCCCCCCCEEEECCCHHHHCCCCCCCCCCEEECCCCEEEECHHHHCCCCCCCC
>Mature Secondary Structure
MRRGFQLTVARWRILRFPLSESTLNFRIFSLRCSDHLVKCFTLSSQRRRIIGIPFFCTST
CCCCEEEEHEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEECCHHHHHH
FLIFFSVCCFFTLFAAFAHKTVLFCILKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEECHHHHHHHHHHH
FPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHK
HHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEC
SSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMASILLDGAIVEDDVMIGAGSLVP
CCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCEEEECCCCCC
QNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP
CCCCCCCCEEEECCCHHHHCCCCCCCCCCEEECCCCEEEECHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]