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The map label for this gene is yhcB [H]

Identifier: 218550510

GI number: 218550510

Start: 3290804

End: 3291202

Strand: Direct

Name: yhcB [H]

Synonym: EFER_3204

Alternate gene names: 218550510

Gene position: 3290804-3291202 (Clockwise)

Preceding gene: 218550506

Following gene: 218550511

Centisome position: 71.72

GC content: 54.14

Gene sequence:

>399_bases
ATGACCTGGGAATATGCGCTAATTGGGTTAGTCGTCGGCATCATTATCGGTGCCGTGGCCATGCGTTTTGGTAATCGTAA
ATTACGTCAACAACAGGCGTTGCAGTACGAACTGGAAAAAAATAAAGCTGAGTTGGATGAGTACCGCGAAGAGCTGGTTA
ACCACTTTGCCCGCAGCGCCGAATTACTGGACACCATGGCGCACGACTATCGCCAGCTGTACCAGCATATGGCGAAAAGC
TCCAGCAGCCTGCTGCCGGAGCTGTCTGCGGAGGCTAACCCGTTCCGCAACCGTCTGGCGGAATCTGAAGCCAGTAATGA
TCAGGCACCGGTGCAAATGCCGCGTGACTATTCCGAAGGCGCTTCCGGCCTGCTGCGTAGTGGCGCAAAACGCGATTAA

Upstream 100 bases:

>100_bases
TCCACTTCTACGGGATTAACGGTTATAGTGGCATTATCAGCCGCAGGCATGGAGCCTGAAGCCAACACCCTACGGAAACA
AAAGACAACGGGAGATGTTC

Downstream 100 bases:

>100_bases
TTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTGTCCTGGCCCGACTATCATTTAATCTGACATCTGATTGTTCG
CAGATTAGAAATTCAATAAC

Product: cytochrome d ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVNHFARSAELLDTMAHDYRQLYQHMAKS
SSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRSGAKRD

Sequences:

>Translated_132_residues
MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVNHFARSAELLDTMAHDYRQLYQHMAKS
SSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRSGAKRD
>Mature_131_residues
TWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVNHFARSAELLDTMAHDYRQLYQHMAKSS
SSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRSGAKRD

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=132, Percent_Identity=98.4848484848485, Blast_Score=268, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 14974; Mature: 14843

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVNHFARSA
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEG
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
ASGLLRSGAKRD
HHHHHHCCCCCC
>Mature Secondary Structure 
TWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVNHFARSA
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEG
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
ASGLLRSGAKRD
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]