| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yhbX [H]
Identifier: 218550457
GI number: 218550457
Start: 3239777
End: 3241378
Strand: Reverse
Name: yhbX [H]
Synonym: EFER_3151
Alternate gene names: 218550457
Gene position: 3241378-3239777 (Counterclockwise)
Preceding gene: 218550458
Following gene: 218550455
Centisome position: 70.64
GC content: 41.39
Gene sequence:
>1602_bases TTGGGGATGGCTGCACATAACGTATTTCGAAAAATTAAAAATAACTGGCTTATAATTTTTTGTGTAATTATTTTTTCTCT GATTAATATCATTGCTTCTTCAGGATCACATCTGGTTCATCGAACACTTTTCTTTGTGCTTTTTATCCTTGTTATAAAAC GCACAGCGTCTTTCCCTTTACGTTTATTATTTGGTATCCCAGTTATGCTGTTGGCTGCTGCGGATCTCTGCATCAGCCTC TATGCATGGTGTACCTTCGGCACCAGTTTCAATGATGGCTTTGCGATAAGCGTTTTACAAAGTGATCCAGATGAGATTAC AAAGATGCTGGGGCTTTATATTGTTTATTGCATTATTTTCCTTGCCCTGTTCGCACTCTTTTTATCCTCGGTAATAATAT ATGATGTTTCGCTACCGGGTAAAAAAATCACAGTGACGTTGTTGCTGATTCTGATTGCGATAAGCTTATTTTCTTCAGTC AAGTTTGCCCTTAAAGATAAAAAAACAAAGAAAACGGTAGATCCTTATATTGTGGCATCCCGATTCGCAACATATACACC CTTTTTCAACTTAAATTATTTCGCTTTAGCCGCAAAGGAATACCACAGGCTGATGGCCATTGCTGACAAAGTGCCAGGCT ATCAATTAGAACTAAGCGATAATGGCATCGATGACTATGTATTAATTGTAGGGGAGTCAGTAAGGGCCTCGAATATGTCC ATCTATGGGCATTACAGATCGACAACGCCACAGCTCGAAAAACAGAAGGATCGTATTAAGCTTTTTACTCAGGCGATAAG CGGAGCGCCTTATACTGCGTTAGCCGTTCCCCTTACTTTAACTGTGGATACTGTATTTGATCACGATATCCAGCATTACC CTGACAACATCATTAATATGGCTAATCAGGCTGGGTTTGACACATACTGGCTTAGTGCTCAATCTGCATTCAGACAGAAC GGGACTGCTGTTGCCAGTATTGCGATGCGAGCGAAAGAAAGAGTCTATGTCAGAGGATATGACGAATTGTTGCTTCCGCA TCTGGCTGAGGCATTAAATACAAAATCGCCAAATAAGAAACTGATTGTTCTCCATCTGGTTGGCAGTCATGAACCTGTTT GCGCCACATATCCAAAAGCCAAAGCTGTGTATTATCCATTGGATAATCAGGATGCCTGTTATGACAACTCAATTCATTAC ACCGATAGCATTTTAGGGCAGGTCTTTGCGCTGCTTAAAAATAAGCGAGCCTCGGTTATGTATTTTGCTGACCATGGGCT TGAACGCGATCCAACGGCAAAACATAGCTATTTCCACGGTGGGAAGAAACCTAGTCAGGAAGCTTATCATGTACCGATGT TTATCTGGTACAGCCCAATGCTCGGTGAGAACGTTGATCGTTCGACAGTAACTGATATTTTTTCCACTGCTTATAACGAC TATCTTATCAATGCGTGGATGGGCGTTACCCGACCAGAACAACCTAAAACACTTAAAGACGTGATCTCTCACTATCAGGG GGATTCGCGGGTTATTGACGGAAGCCATGAAATGTTTGATTACCGGGAACTAAGACGAAATTTTAATGCGGACAAGCAGT AA
Upstream 100 bases:
>100_bases AGTGTAAACATTTTTTCAAAATGATATAGATCAGGACTTCAGTTTTTCTAATGTATAAAATCGCACGCCGTCGATATTTA CTCTGTTCTTATCTACGGGT
Downstream 100 bases:
>100_bases CTGAATTACCCTGCCCATAAAAGGGCAGGGAAAAATTGATGTTTTATTTCGCTTTATTTTCCAGATTCTCCACCTGCGGC ACGCCTGAGGCGGCAGAGGA
Product: inner membrane sulfatase YhbX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MGMAAHNVFRKIKNNWLIIFCVIIFSLINIIASSGSHLVHRTLFFVLFILVIKRTASFPLRLLFGIPVMLLAAADLCISL YAWCTFGTSFNDGFAISVLQSDPDEITKMLGLYIVYCIIFLALFALFLSSVIIYDVSLPGKKITVTLLLILIAISLFSSV KFALKDKKTKKTVDPYIVASRFATYTPFFNLNYFALAAKEYHRLMAIADKVPGYQLELSDNGIDDYVLIVGESVRASNMS IYGHYRSTTPQLEKQKDRIKLFTQAISGAPYTALAVPLTLTVDTVFDHDIQHYPDNIINMANQAGFDTYWLSAQSAFRQN GTAVASIAMRAKERVYVRGYDELLLPHLAEALNTKSPNKKLIVLHLVGSHEPVCATYPKAKAVYYPLDNQDACYDNSIHY TDSILGQVFALLKNKRASVMYFADHGLERDPTAKHSYFHGGKKPSQEAYHVPMFIWYSPMLGENVDRSTVTDIFSTAYND YLINAWMGVTRPEQPKTLKDVISHYQGDSRVIDGSHEMFDYRELRRNFNADKQ
Sequences:
>Translated_533_residues MGMAAHNVFRKIKNNWLIIFCVIIFSLINIIASSGSHLVHRTLFFVLFILVIKRTASFPLRLLFGIPVMLLAAADLCISL YAWCTFGTSFNDGFAISVLQSDPDEITKMLGLYIVYCIIFLALFALFLSSVIIYDVSLPGKKITVTLLLILIAISLFSSV KFALKDKKTKKTVDPYIVASRFATYTPFFNLNYFALAAKEYHRLMAIADKVPGYQLELSDNGIDDYVLIVGESVRASNMS IYGHYRSTTPQLEKQKDRIKLFTQAISGAPYTALAVPLTLTVDTVFDHDIQHYPDNIINMANQAGFDTYWLSAQSAFRQN GTAVASIAMRAKERVYVRGYDELLLPHLAEALNTKSPNKKLIVLHLVGSHEPVCATYPKAKAVYYPLDNQDACYDNSIHY TDSILGQVFALLKNKRASVMYFADHGLERDPTAKHSYFHGGKKPSQEAYHVPMFIWYSPMLGENVDRSTVTDIFSTAYND YLINAWMGVTRPEQPKTLKDVISHYQGDSRVIDGSHEMFDYRELRRNFNADKQ >Mature_532_residues GMAAHNVFRKIKNNWLIIFCVIIFSLINIIASSGSHLVHRTLFFVLFILVIKRTASFPLRLLFGIPVMLLAAADLCISLY AWCTFGTSFNDGFAISVLQSDPDEITKMLGLYIVYCIIFLALFALFLSSVIIYDVSLPGKKITVTLLLILIAISLFSSVK FALKDKKTKKTVDPYIVASRFATYTPFFNLNYFALAAKEYHRLMAIADKVPGYQLELSDNGIDDYVLIVGESVRASNMSI YGHYRSTTPQLEKQKDRIKLFTQAISGAPYTALAVPLTLTVDTVFDHDIQHYPDNIINMANQAGFDTYWLSAQSAFRQNG TAVASIAMRAKERVYVRGYDELLLPHLAEALNTKSPNKKLIVLHLVGSHEPVCATYPKAKAVYYPLDNQDACYDNSIHYT DSILGQVFALLKNKRASVMYFADHGLERDPTAKHSYFHGGKKPSQEAYHVPMFIWYSPMLGENVDRSTVTDIFSTAYNDY LINAWMGVTRPEQPKTLKDVISHYQGDSRVIDGSHEMFDYRELRRNFNADKQ
Specific function: Involved In Adherence (By Similarity). [C]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family [H]
Homologues:
Organism=Escherichia coli, GI87082223, Length=532, Percent_Identity=69.3609022556391, Blast_Score=793, Evalue=0.0, Organism=Escherichia coli, GI1790392, Length=545, Percent_Identity=22.9357798165138, Blast_Score=122, Evalue=8e-29, Organism=Escherichia coli, GI1787035, Length=281, Percent_Identity=29.1814946619217, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI87082286, Length=411, Percent_Identity=25.0608272506083, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI87082372, Length=301, Percent_Identity=26.9102990033223, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 60228; Mature: 60097
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMAAHNVFRKIKNNWLIIFCVIIFSLINIIASSGSHLVHRTLFFVLFILVIKRTASFPL CCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH RLLFGIPVMLLAAADLCISLYAWCTFGTSFNDGFAISVLQSDPDEITKMLGLYIVYCIIF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH LALFALFLSSVIIYDVSLPGKKITVTLLLILIAISLFSSVKFALKDKKTKKTVDPYIVAS HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RFATYTPFFNLNYFALAAKEYHRLMAIADKVPGYQLELSDNGIDDYVLIVGESVRASNMS HHHHCCCCCCCCHHEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCEE IYGHYRSTTPQLEKQKDRIKLFTQAISGAPYTALAVPLTLTVDTVFDHDIQHYPDNIINM EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCHHHHCCHHHHHH ANQAGFDTYWLSAQSAFRQNGTAVASIAMRAKERVYVRGYDELLLPHLAEALNTKSPNKK HHHCCCCCEEECHHHHHHCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCE LIVLHLVGSHEPVCATYPKAKAVYYPLDNQDACYDNSIHYTDSILGQVFALLKNKRASVM EEEEEEECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE YFADHGLERDPTAKHSYFHGGKKPSQEAYHVPMFIWYSPMLGENVDRSTVTDIFSTAYND EEECCCCCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCHHCCCCCHHHHHHHHHHHHHH YLINAWMGVTRPEQPKTLKDVISHYQGDSRVIDGSHEMFDYRELRRNFNADKQ HHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GMAAHNVFRKIKNNWLIIFCVIIFSLINIIASSGSHLVHRTLFFVLFILVIKRTASFPL CCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH RLLFGIPVMLLAAADLCISLYAWCTFGTSFNDGFAISVLQSDPDEITKMLGLYIVYCIIF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH LALFALFLSSVIIYDVSLPGKKITVTLLLILIAISLFSSVKFALKDKKTKKTVDPYIVAS HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RFATYTPFFNLNYFALAAKEYHRLMAIADKVPGYQLELSDNGIDDYVLIVGESVRASNMS HHHHCCCCCCCCHHEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCEE IYGHYRSTTPQLEKQKDRIKLFTQAISGAPYTALAVPLTLTVDTVFDHDIQHYPDNIINM EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCHHHHCCHHHHHH ANQAGFDTYWLSAQSAFRQNGTAVASIAMRAKERVYVRGYDELLLPHLAEALNTKSPNKK HHHCCCCCEEECHHHHHHCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCE LIVLHLVGSHEPVCATYPKAKAVYYPLDNQDACYDNSIHYTDSILGQVFALLKNKRASVM EEEEEEECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE YFADHGLERDPTAKHSYFHGGKKPSQEAYHVPMFIWYSPMLGENVDRSTVTDIFSTAYND EEECCCCCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCHHCCCCCHHHHHHHHHHHHHH YLINAWMGVTRPEQPKTLKDVISHYQGDSRVIDGSHEMFDYRELRRNFNADKQ HHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]