Definition Escherichia fergusonii ATCC 35469 chromosome, complete genome.
Accession NC_011740
Length 4,588,711

Click here to switch to the map view.

The map label for this gene is 218550441

Identifier: 218550441

GI number: 218550441

Start: 3221682

End: 3222062

Strand: Direct

Name: 218550441

Synonym: EFER_3135

Alternate gene names: NA

Gene position: 3221682-3222062 (Clockwise)

Preceding gene: 218550440

Following gene: 218550442

Centisome position: 70.21

GC content: 45.93

Gene sequence:

>381_bases
ATGATCATTTACGGTTTGATGTTAATGGGATTTTGTATGTTCGCCGGTCTGATGGTTGGCGATCTATTAGGCGCTTTACT
GGGGATCTCAGCCAATATTGGTGGCATAGGTTTTGCCATGCTTTTCCTGGTCGTGTCATCACAAAAACTAATAGAAAAAG
GACTGCTGTCAAAACCAGCAGAACAAGGAGTGGGTTTCTGGAGTGCGATGTATATCCCCATCGTTGTCGCCATGTCTGCG
AATCAGAATGTTATTGCCGCACTTAAGGGTGGACCGGTGGCAGTTATTGCCGGACTCGGCGCGGTATTTATTGGTTTCCT
GCTAATAAAACCGCTGAGCAAAATAGGCAGTAAGCCTTCTGACCAGCAAGTTGTAGACTAA

Upstream 100 bases:

>100_bases
TGTGCTGAAAGCTATTGTTTATTTATTGTTACTAAAAGACGGCAATCATGACACCGTTTTAACGTTTTGCTTTTAGTATG
GATAAGCAAAGAGAAACATC

Downstream 100 bases:

>100_bases
CGAGTAAGGCGAAAATATGGAACAGATATTCAAAACGCTATCCGGAAATTTTACCAGTAATGGCTTAATCACCGCGTTTG
TCGTCGTCGGCGTTGTTTGC

Product: malonate transporter subunit MadL

Products: NA

Alternate protein names: Malonate Transporter Subunit MadL; Malonate Transporter; Malonate Carrier Protein; Malonate/Sodium Symporter MadL Subunit; Malonate Transporter L Subunit; MalonateSodium Symporter Subunit MadL; Malonate Transporter Subunit

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MIIYGLMLMGFCMFAGLMVGDLLGALLGISANIGGIGFAMLFLVVSSQKLIEKGLLSKPAEQGVGFWSAMYIPIVVAMSA
NQNVIAALKGGPVAVIAGLGAVFIGFLLIKPLSKIGSKPSDQQVVD

Sequences:

>Translated_126_residues
MIIYGLMLMGFCMFAGLMVGDLLGALLGISANIGGIGFAMLFLVVSSQKLIEKGLLSKPAEQGVGFWSAMYIPIVVAMSA
NQNVIAALKGGPVAVIAGLGAVFIGFLLIKPLSKIGSKPSDQQVVD
>Mature_126_residues
MIIYGLMLMGFCMFAGLMVGDLLGALLGISANIGGIGFAMLFLVVSSQKLIEKGLLSKPAEQGVGFWSAMYIPIVVAMSA
NQNVIAALKGGPVAVIAGLGAVFIGFLLIKPLSKIGSKPSDQQVVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13002; Mature: 13002

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIYGLMLMGFCMFAGLMVGDLLGALLGISANIGGIGFAMLFLVVSSQKLIEKGLLSKPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
EQGVGFWSAMYIPIVVAMSANQNVIAALKGGPVAVIAGLGAVFIGFLLIKPLSKIGSKPS
HHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DQQVVD
CCCCCC
>Mature Secondary Structure
MIIYGLMLMGFCMFAGLMVGDLLGALLGISANIGGIGFAMLFLVVSSQKLIEKGLLSKPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
EQGVGFWSAMYIPIVVAMSANQNVIAALKGGPVAVIAGLGAVFIGFLLIKPLSKIGSKPS
HHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DQQVVD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA