Click here to switch to the map view.

The map label for this gene is yhbV [H]

Identifier: 218550428

GI number: 218550428

Start: 3210258

End: 3211136

Strand: Direct

Name: yhbV [H]

Synonym: EFER_3122

Alternate gene names: 218550428

Gene position: 3210258-3211136 (Clockwise)

Preceding gene: 218550427

Following gene: 218550429

Centisome position: 69.96

GC content: 56.43

Gene sequence:

>879_bases
ATGAAATATTCCTTAGGGCCGGTGCTGTGGTACTGGCCAAAAGAGACGCTGGAAGATTTTTATCAGCAGGCCGCCGCCAG
CAGCGCCGACGTGATTTATCTCGGTGAAGCGGTCTGTAGCAAACGCCGGGCAACCAAAGTTGGCGACTGGCTGGAGATGG
CAAAATCGCTCGCCGGAAGTGGCAAGCAGATTGTGCTCTCCACGCTGGCGCTGGTGCAGGCATCCTCCGAACTGGGCGAA
CTGAAACGCTATGTTGAGAACGGTGAGTTTCTGATTGAAGCCAGCGATCTCGGCGTGGTGAATATGTGCGCTGAGCGCAA
ACTGCCGTTCGTCGCCGGACACGCGCTGAACTGCTACAACGCGGTGACGCTGAAAATATTGCTCAAACAGGGCATGATGC
GCTGGTGTATGCCGGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGCAAC
CAGTTTGAAGTGGAAGTCTTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGA
CCGCCCGAAAGATGAGTGTGAAACCTGCTGCATTAAGTATCCGAACGGGCGCAACGTGCTGTCGCAGGAAAACCAACAAG
TGTTTGTGCTCAATGGCATTCAGACCATGAGCGGCTACGTGTACAACCTCGGTAACGAGCTGGCATCCATGCAGGGGCTG
GTTGATGTGGTCCGCCTGTCACCGCAGGGTACTGACACTTTCGCTATGCTCGACGCCTTCCGCGCTAATGAAAATGGTGC
TGCACCACTCCCGTTGACGGCAAACAGCGACTGTAACGGCTACTGGAGACGGCTGGCTGGGCTGGAACTGCAAGCCTAA

Upstream 100 bases:

>100_bases
TCGTGCCGCAAAGCGCGTGGATGGAGACGCTCGGGTCGATGTCCGAAGGCACGCAAACCACTCTTGGCGCGTATCACCGT
AAATGGCAGTGAGAAAAGTA

Downstream 100 bases:

>100_bases
GCAAATAGCTCACTTTGTTAACAACTTTAACTACCCTTTAATGCAGTATTAAAGATTAATCGGTAACAAAGTGAGCTGTT
ATGACTGATAAAACCATTGC

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKYSLGPVLWYWPKETLEDFYQQAAASSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGE
LKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL
VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA

Sequences:

>Translated_292_residues
MKYSLGPVLWYWPKETLEDFYQQAAASSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGE
LKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL
VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA
>Mature_292_residues
MKYSLGPVLWYWPKETLEDFYQQAAASSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGE
LKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL
VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=292, Percent_Identity=99.3150684931507, Blast_Score=600, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 32492; Mature: 32492

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSLGPVLWYWPKETLEDFYQQAAASSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGS
CCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
GKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEECCHHHHHH
AVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC
HHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCEE
FTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL
EECCCCCCCHHHHHHEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKYSLGPVLWYWPKETLEDFYQQAAASSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGS
CCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
GKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEECCHHHHHH
AVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC
HHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEECCEE
FTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL
EECCCCCCCHHHHHHEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]