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The map label for this gene is yhbQ [H]

Identifier: 218550424

GI number: 218550424

Start: 3207735

End: 3208037

Strand: Direct

Name: yhbQ [H]

Synonym: EFER_3118

Alternate gene names: 218550424

Gene position: 3207735-3208037 (Clockwise)

Preceding gene: 218550422

Following gene: 218550427

Centisome position: 69.9

GC content: 53.14

Gene sequence:

>303_bases
ATGACACCCTGGTTTCTTTACTTGATCCGTACCGCCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCG
CTATCAGCAACATCAAAGCGGCAAAGGCGCAAAAGCACTGCGTGGGAAAGGTGAACTGACGCTGGCATTTTCCGCGCCAG
TGGGCGACCGTTCGCTGGCACTACGGGCGGAATATCGCGTTAAACAACTGACCAAACGGCAAAAAGAACGTCTGGTAGCG
GAAGGCTCAGGGTTTGCAGAGCTGATAAGCAGCCTGCAAACCCCGGAGATTAAAAGCGATTGA

Upstream 100 bases:

>100_bases
ACAACATGTTGTTTTGCCAGCCAACGGCTGATGGCGGTGAGTGTTTCCATTGCTGTTCTCTTTTATACTGTGGGCCTGAC
CTTAACATGCGACGCAGACG

Downstream 100 bases:

>100_bases
AGTGTTCGTGATACTCAACCAAACCGGTTACGCCATTCAGCGCATCATCCGCTAAACGATGTACCTGGAAGGCGCTTTCA
GTGCCCGGCCAGCGGCAACG

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVA
EGSGFAELISSLQTPEIKSD

Sequences:

>Translated_100_residues
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVA
EGSGFAELISSLQTPEIKSD
>Mature_99_residues
TPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAE
GSGFAELISSLQTPEIKSD

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=100, Percent_Identity=97, Blast_Score=200, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022992
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 11258; Mature: 11127

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLA
CCCEEEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCCEE
LRAEYRVKQLTKRQKERLVAEGSGFAELISSLQTPEIKSD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLA
CCEEEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCCEE
LRAEYRVKQLTKRQKERLVAEGSGFAELISSLQTPEIKSD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA