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The map label for this gene is yraQ [H]

Identifier: 218550420

GI number: 218550420

Start: 3204867

End: 3205907

Strand: Reverse

Name: yraQ [H]

Synonym: EFER_3114

Alternate gene names: 218550420

Gene position: 3205907-3204867 (Counterclockwise)

Preceding gene: 218550421

Following gene: 218550414

Centisome position: 69.87

GC content: 57.06

Gene sequence:

>1041_bases
ATGACTGGTCAGTCTTCATCTCAGGCGGCAACGCCCATTCAGTGGTGGAAACCCGCGCTTTTCTTTCTCGTTGTCATTGC
CGGACTTTGGTATGTGAAATGGCAACCTTACTACGGTAAAGCCTTTACTGCCGCCGAAACTCACAGTATCGGTAAATCTA
TCCTTGCGCAGGCGGATGCTAATCCGTGGCAAGCTGCGTGGGACTACGCGATGGTCTATTTCCTCGCGGTATGGAAAGCG
GCGGTGCTGGGGGTGATCCTCGGGTCGTTGATTCAGGTGCTGATCCCTCGTGACTGGCTGCTACGCACGCTGGGGCAATC
GCGCTTTCGCGGGACGCTGCTGGGGACGCTGTTTTCGCTGCCGGGTATGATGTGTACCTGCTGTGCGGCACCGGTCGCGG
CGGGGATGCGTCGCCAACAGGTATCGATGGGGGGCGCGCTGGCATTCTGGATGGGGAATCCGTTGTTAAACCCGGCGACG
CTGGTATTCATGGGATTTGTCCTTGGCTGGGGCTTTGCCGCGATTCGTCTGGTGGCGGGGCTGGTGATGGTGTTGTTGAT
TGCGACACTGGTGCAAAAATGGGTACGTGAGACACCGCAAACGCAGGCGCCAGTCGAAATTGACATGCCGGAAGTGCAGG
GCGGATTCTTTAGCCGCTGGGGTAGGGCGCTATGGACGCTTTTCTGGAGTACGATCCCGGTATATATCCTTGCCGTACTG
GCGTTGGGTGCCGCTCGCGTCTGGTTATTCCCCCATGCCGATGGTGCTGTCGATAACAGCCTGATGTGGGTGGTGGCGAT
GGCGGTAGCGGGATGCTTGTTTGTCATTCCCACGGCAGCAGAAATTCCGATTGTACAAACGATGATGCTGACAGGTATGG
GAACCGCTCCGGCGCTGGCATTGTTAATGACGCTTCCTGCTGTAAGTTTGCCGTCGCTGATAATGTTGCGTAAAGCGTTC
CCGGCGAAAGCCTTATGGCTGACGGGTGCGATGGTGGCGGTGTCTGGTGTGATTGTCGGTAGTCTGGCGCTGTTGTTCTA
A

Upstream 100 bases:

>100_bases
TTCAGAATTACGCAAAAGAGCTGAATAATTATTCCCAAGAATTGATAGTGAGCGTAATATTCACGCGCTTAATTATCATA
ACTTATTCCTGGGGAATGCT

Downstream 100 bases:

>100_bases
ATATAGCGGATGCGGCGCGAGCGGGCGCCTTATCCGGCCCACGGTTGTGTCGTTGTAGACCTGATGCGACAAACGTCGCA
TCAGGCAAAGGCAAACTGCA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTAAETHSIGKSILAQADANPWQAAWDYAMVYFLAVWKA
AVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPLLNPAT
LVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDMPEVQGGFFSRWGRALWTLFWSTIPVYILAVL
ALGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLTGMGTAPALALLMTLPAVSLPSLIMLRKAF
PAKALWLTGAMVAVSGVIVGSLALLF

Sequences:

>Translated_346_residues
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTAAETHSIGKSILAQADANPWQAAWDYAMVYFLAVWKA
AVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPLLNPAT
LVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDMPEVQGGFFSRWGRALWTLFWSTIPVYILAVL
ALGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLTGMGTAPALALLMTLPAVSLPSLIMLRKAF
PAKALWLTGAMVAVSGVIVGSLALLF
>Mature_345_residues
TGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTAAETHSIGKSILAQADANPWQAAWDYAMVYFLAVWKAA
VLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPLLNPATL
VFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDMPEVQGGFFSRWGRALWTLFWSTIPVYILAVLA
LGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLTGMGTAPALALLMTLPAVSLPSLIMLRKAFP
AKALWLTGAMVAVSGVIVGSLALLF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

Organism=Escherichia coli, GI1789541, Length=346, Percent_Identity=97.3988439306358, Blast_Score=665, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 37407; Mature: 37276

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTAAETHSIGKSILAQADA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
NPWQAAWDYAMVYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPLLNPATLVFMGFVLGWGFAAIRLVAG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVMVLLIATLVQKWVRETPQTQAPVEIDMPEVQGGFFSRWGRALWTLFWSTIPVYILAVL
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLTGMGTAPALA
HHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHH
LLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGSLALLF
HHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTAAETHSIGKSILAQADA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
NPWQAAWDYAMVYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPLLNPATLVFMGFVLGWGFAAIRLVAG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVMVLLIATLVQKWVRETPQTQAPVEIDMPEVQGGFFSRWGRALWTLFWSTIPVYILAVL
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLTGMGTAPALA
HHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHH
LLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGSLALLF
HHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]