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The map label for this gene is hpaR [H]

Identifier: 218550369

GI number: 218550369

Start: 3136344

End: 3136784

Strand: Reverse

Name: hpaR [H]

Synonym: EFER_3061

Alternate gene names: 218550369

Gene position: 3136784-3136344 (Counterclockwise)

Preceding gene: 218550384

Following gene: 218550367

Centisome position: 68.36

GC content: 50.79

Gene sequence:

>441_bases
ATGCACGATTCTTTAACCATTGCGTTGCTCCAGGCGCGTGAAGTGGCGATGAGTTATTTTCGTCCTATTGTTAAGCGCCA
CAATTTGACTGAACAGCAGTGGCGCATCGTGCGTATTCTGGCGGAAGGAAAGTCGATGGATTTTCACGATCTGGCTTATC
GCGCCTGTATTTTGCGCCCAAGCCTGACCGGTATCCTGACGCGGATGGAGCGCGACGGCCTGGTGCTACGCTTAAAACCG
ATTAATGATCAGCGCAAGCTATATGTTTCATTAACTCAGGAAGGGCAGACGCTCTATTCCCACGCGCAGGCGCAGGTTGA
AGAGGCTTATAGACAAATTGAAGCGCAGTTCACCGCTGAGAAAATGCAGCAGTTAACCGTGTTGCTGGAGGAGTTTATTA
CCCTGGGAAAAGGCGGTGATGAAACGTGTGGGGAAGCGTAA

Upstream 100 bases:

>100_bases
AGTTTGCTACACTGAGTGGTCTGAGAAACCGGTTGCTGAGTGGGCTACGGCCTGCTAATTGTTTCGTTATTAATGATTTT
CTGAAACTTGGGGTTGTACC

Downstream 100 bases:

>100_bases
GAGCGGTATCCCGGAGATATCTCTCCGGGATTGATCCTCTAAATAATTCGAGTCGCAGTACATGCAACTTGAAGTATGGC
GAGCAGAAATCAAAACAATG

Product: 4-hydroxyphenylacetate degradative operon repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MHDSLTIALLQAREVAMSYFRPIVKRHNLTEQQWRIVRILAEGKSMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKP
INDQRKLYVSLTQEGQTLYSHAQAQVEEAYRQIEAQFTAEKMQQLTVLLEEFITLGKGGDETCGEA

Sequences:

>Translated_146_residues
MHDSLTIALLQAREVAMSYFRPIVKRHNLTEQQWRIVRILAEGKSMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKP
INDQRKLYVSLTQEGQTLYSHAQAQVEEAYRQIEAQFTAEKMQQLTVLLEEFITLGKGGDETCGEA
>Mature_146_residues
MHDSLTIALLQAREVAMSYFRPIVKRHNLTEQQWRIVRILAEGKSMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKP
INDQRKLYVSLTQEGQTLYSHAQAQVEEAYRQIEAQFTAEKMQQLTVLLEEFITLGKGGDETCGEA

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16795; Mature: 16795

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDSLTIALLQAREVAMSYFRPIVKRHNLTEQQWRIVRILAEGKSMDFHDLAYRACILRP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
SLTGILTRMERDGLVLRLKPINDQRKLYVSLTQEGQTLYSHAQAQVEEAYRQIEAQFTAE
HHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KMQQLTVLLEEFITLGKGGDETCGEA
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHDSLTIALLQAREVAMSYFRPIVKRHNLTEQQWRIVRILAEGKSMDFHDLAYRACILRP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
SLTGILTRMERDGLVLRLKPINDQRKLYVSLTQEGQTLYSHAQAQVEEAYRQIEAQFTAE
HHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KMQQLTVLLEEFITLGKGGDETCGEA
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]