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The map label for this gene is zupT [H]

Identifier: 218550291

GI number: 218550291

Start: 3051538

End: 3052416

Strand: Reverse

Name: zupT [H]

Synonym: EFER_2983

Alternate gene names: 218550291

Gene position: 3052416-3051538 (Counterclockwise)

Preceding gene: 218550293

Following gene: 218550283

Centisome position: 66.52

GC content: 48.12

Gene sequence:

>879_bases
ATGATCATCATTGTTATCCGGGTTCTTCATTTTCCGAAACAGCGTATGGTGAAGACATCACAAATGACACCTTTAGTGAA
GGATATCATCATGTCTTCAACGCGTATGCCAGCTTTGTTTTTGGGACACGGTAGTCCAATGAACGTTTTACAGAATAATC
GCTACACCCAGGCATGGCAGCGTCTGGGGGAGACATTGCCACGTCCGAAAGCCATAGTCGTTGTTTCAGCACACTGGTTT
ACTCGTGGAACGGGAGTTACCGCGATGGAAATGCCGCCGACAATCCATGACTTTGGTGGTTTTCCCCAGGCACTTTACGA
AACTCATTATCCCGCCCCCGGTTCGCCTGCACTGGCACAGCAATTGGTAGAGCTGCTGGCTCCGACTCCTGTTACGCTTG
ACCTTGAGGCATGGGGATTTGACCATGGTTCCTGGGGCGTGCTGATAAAAATGTACCCAAATGCCGATATCCCGATGGTG
CAATTGAGTATCGATAGCACGAAACCTGCTGCATGGCATTTTGAAATAGGGCGTAAGTTGGCTGCATTGCGTGACGAAGG
AATTATGCTGATTGCCAGCGGTAATGTGGTTCATAATCTGCGAACTGCCAAATGGCATGGCGATGAATCACCTTATCCAT
GGGCGGTATCGTTCAGTGATTTTGTGAAAGCCAATCTGACATGGAAAGGGCCAACAGCAGAGCATCCGTTGGTAAATTAT
CTCGAACATGAAAGTGGTGTTTTATCTAATCCGACGCCAGAACATTACCTGCCATTACTGTATATGCTGGGAAGCTGGGA
TGGAGAAGAAGCAGTGACGATTCCGGTAGAGGGGATTGAAATGGGAAGCCTGAGTATGTTGTCAGTACAGATTGGCTAA

Upstream 100 bases:

>100_bases
TAAAGGTGGCGGCACCCGCCAGTAAGGTCAGAATCAGAGGTACTGACATAAAAAACTCCTTATAAATCTGCTGCCCGGCT
GACCTTCAAAATAACTGATA

Downstream 100 bases:

>100_bases
GCAATGAATAAAACCGAAGCCAGAAGCCTGGCTTCGGTTTGCATTACTTACCTTCTTACCAGCTTAAGTCCCCATGCACC
ACTCATTACCAGCAGCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIIIVIRVLHFPKQRMVKTSQMTPLVKDIIMSSTRMPALFLGHGSPMNVLQNNRYTQAWQRLGETLPRPKAIVVVSAHWF
TRGTGVTAMEMPPTIHDFGGFPQALYETHYPAPGSPALAQQLVELLAPTPVTLDLEAWGFDHGSWGVLIKMYPNADIPMV
QLSIDSTKPAAWHFEIGRKLAALRDEGIMLIASGNVVHNLRTAKWHGDESPYPWAVSFSDFVKANLTWKGPTAEHPLVNY
LEHESGVLSNPTPEHYLPLLYMLGSWDGEEAVTIPVEGIEMGSLSMLSVQIG

Sequences:

>Translated_292_residues
MIIIVIRVLHFPKQRMVKTSQMTPLVKDIIMSSTRMPALFLGHGSPMNVLQNNRYTQAWQRLGETLPRPKAIVVVSAHWF
TRGTGVTAMEMPPTIHDFGGFPQALYETHYPAPGSPALAQQLVELLAPTPVTLDLEAWGFDHGSWGVLIKMYPNADIPMV
QLSIDSTKPAAWHFEIGRKLAALRDEGIMLIASGNVVHNLRTAKWHGDESPYPWAVSFSDFVKANLTWKGPTAEHPLVNY
LEHESGVLSNPTPEHYLPLLYMLGSWDGEEAVTIPVEGIEMGSLSMLSVQIG
>Mature_292_residues
MIIIVIRVLHFPKQRMVKTSQMTPLVKDIIMSSTRMPALFLGHGSPMNVLQNNRYTQAWQRLGETLPRPKAIVVVSAHWF
TRGTGVTAMEMPPTIHDFGGFPQALYETHYPAPGSPALAQQLVELLAPTPVTLDLEAWGFDHGSWGVLIKMYPNADIPMV
QLSIDSTKPAAWHFEIGRKLAALRDEGIMLIASGNVVHNLRTAKWHGDESPYPWAVSFSDFVKANLTWKGPTAEHPLVNY
LEHESGVLSNPTPEHYLPLLYMLGSWDGEEAVTIPVEGIEMGSLSMLSVQIG

Specific function: Unknown

COG id: COG3384

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DODA-type extradiol aromatic ring- opening dioxygenase family [H]

Homologues:

Organism=Escherichia coli, GI226510974, Length=262, Percent_Identity=86.6412213740458, Blast_Score=482, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014436
- InterPro:   IPR004183 [H]

Pfam domain/function: PF02900 LigB [H]

EC number: NA

Molecular weight: Translated: 32396; Mature: 32396

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIVIRVLHFPKQRMVKTSQMTPLVKDIIMSSTRMPALFLGHGSPMNVLQNNRYTQAWQ
CEEEEEEEHHCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCHHHHHH
RLGETLPRPKAIVVVSAHWFTRGTGVTAMEMPPTIHDFGGFPQALYETHYPAPGSPALAQ
HHHHHCCCCCEEEEEEEEEEECCCCEEEEECCCCHHHCCCCCHHHHHCCCCCCCCHHHHH
QLVELLAPTPVTLDLEAWGFDHGSWGVLIKMYPNADIPMVQLSIDSTKPAAWHFEIGRKL
HHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEHHHHHHH
AALRDEGIMLIASGNVVHNLRTAKWHGDESPYPWAVSFSDFVKANLTWKGPTAEHPLVNY
HHCCCCCEEEEECCCEEEEEEEEEECCCCCCCCEEEEHHHHEEEEEEECCCCCCCHHHHH
LEHESGVLSNPTPEHYLPLLYMLGSWDGEEAVTIPVEGIEMGSLSMLSVQIG
HHHCCCCCCCCCCHHHHHHHHEECCCCCCCEEEEEECCCEECCEEEEEEEEC
>Mature Secondary Structure
MIIIVIRVLHFPKQRMVKTSQMTPLVKDIIMSSTRMPALFLGHGSPMNVLQNNRYTQAWQ
CEEEEEEEHHCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCHHHHHH
RLGETLPRPKAIVVVSAHWFTRGTGVTAMEMPPTIHDFGGFPQALYETHYPAPGSPALAQ
HHHHHCCCCCEEEEEEEEEEECCCCEEEEECCCCHHHCCCCCHHHHHCCCCCCCCHHHHH
QLVELLAPTPVTLDLEAWGFDHGSWGVLIKMYPNADIPMVQLSIDSTKPAAWHFEIGRKL
HHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEHHHHHHH
AALRDEGIMLIASGNVVHNLRTAKWHGDESPYPWAVSFSDFVKANLTWKGPTAEHPLVNY
HHCCCCCEEEEECCCEEEEEEEEEECCCCCCCCEEEEHHHHEEEEEEECCCCCCCHHHHH
LEHESGVLSNPTPEHYLPLLYMLGSWDGEEAVTIPVEGIEMGSLSMLSVQIG
HHHCCCCCCCCCCHHHHHHHHEECCCCCCCEEEEEECCCEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1314093; 9278503 [H]