Click here to switch to the map view.

The map label for this gene is yqiB [H]

Identifier: 218550282

GI number: 218550282

Start: 3043087

End: 3043509

Strand: Reverse

Name: yqiB [H]

Synonym: EFER_2974

Alternate gene names: 218550282

Gene position: 3043509-3043087 (Counterclockwise)

Preceding gene: 218550283

Following gene: 218550281

Centisome position: 66.33

GC content: 46.34

Gene sequence:

>423_bases
ATGAAGCGTTACACACCTGACTTTCCTGAAATGATGCGTCTTTGCGAGACTAACTTTTCGCAATTACGCCGTTTGTTGCC
GCGCAACGACGCACCCGGTGAAACAGTAAGCTATCAGGTGGCAAACGCACAATATCGGCTAACGATTGTTGAATCGACCC
GATACACTACGCTGGTGACAATAGAACAGACTGCGCCAGCAATCAGTTACTGGAGTCTTCCGTCAATGACGGTGCGTCTG
TATCATGATGCGATGGTGGCTGAAGTGTGTTCGAGTCAGCAGATTTTTCGCTTCAAAGCGCGGTATGATTATCCCAATAA
AAAGTTGCATCAACGCGACGAAAAGCATCAAATTAATCAGTTTTTAGCGGATTGGCTAAGATACTGTTTAGCACATGGAG
CGATGGCGATTCCGGTTTATTAG

Upstream 100 bases:

>100_bases
ACCAGTGGGTAGAAGAGGGGAAAATCGACAACGCAGCGTCTGTCATCGCTTTGCAATGGTTGCAGCTGCATCATCAAGAG
TTAAAAAACGAGTGGAAATA

Downstream 100 bases:

>100_bases
CGTCGTGAAACCTAAGGACACCATTTGGAAAGCCTGTTAACCCTTCCTTTGGCTGGTGAGGCCACTGTAAGGATCTTACA
AATTACCGATACTCACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKRYTPDFPEMMRLCETNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY

Sequences:

>Translated_140_residues
MKRYTPDFPEMMRLCETNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY
>Mature_140_residues
MKRYTPDFPEMMRLCETNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY

Specific function: Unknown

COG id: COG3151

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789411, Length=140, Percent_Identity=99.2857142857143, Blast_Score=294, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009659 [H]

Pfam domain/function: PF06853 DUF1249 [H]

EC number: NA

Molecular weight: Translated: 16518; Mature: 16518

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYTPDFPEMMRLCETNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVT
CCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEECCCEEEEEE
IEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ
EECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEHCCCCCCCCHHHHHHHHHHHHH
FLADWLRYCLAHGAMAIPVY
HHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MKRYTPDFPEMMRLCETNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVT
CCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEECCCEEEEEE
IEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ
EECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEHCCCCCCCCHHHHHHHHHHHHH
FLADWLRYCLAHGAMAIPVY
HHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]