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The map label for this gene is yiiZ [H]

Identifier: 218550268

GI number: 218550268

Start: 3028218

End: 3029201

Strand: Direct

Name: yiiZ [H]

Synonym: EFER_2960

Alternate gene names: 218550268

Gene position: 3028218-3029201 (Clockwise)

Preceding gene: 218550267

Following gene: 218550269

Centisome position: 65.99

GC content: 41.87

Gene sequence:

>984_bases
ATGAAAGCACTTCGTCCTCTGACGGCATCGCTTATGTTGTTAACCAGTTGTTTATTAATTTCCAATACCACACTGGCGAA
AACAACATTAAAACTGAGTCATAATCAGGATAAAAGCCATGCTGTCCATAAAGCATTAAGCTATTTAGCGGATAAAACCA
AAGAGTATTCTAATGGTGAATTAGTTATTCGCATTTACCCAAATGCGACATTAGGTAATGAGCGTGAATCACTGGAGTTA
ATGAATTCTGGTGCATTACAGATGGTAAAAGTTAATGCCGCATCACTGGAGTCTTTTGCCCCGGATTACAGCCTTTTCAG
TCTGCCGTTCTTATTCCGCGACCGTGATCACTATTATCGTGTTCTGCAAAGTGATTTAGGTAAAAAAATACTTAAGTCAT
CAGAGAGCAAAGGTTTTGTTGGTATTACGTATTATGACGGCGGTGCGAGAAGTTTTTACGCCAATAAACCGATTACAAAA
CCTGAAGATTTAGCAGGAATGAAAATCAGGGTTCAACAAAGCCCCAGTGCTATTGCAATGATGAAAGCACTTGGTGGTGT
CGCCACTCCTATGGCACAGGGCGAACTCTACACCGCACTTCAGCAAGGTGTGGTTGATGGCGGAGAAAACAGTACCGTAG
TTTATTCCGATATGCGTCACGCCGAAGTCGCAAAAATCTATTCACGTGATGAACACACCATGGTACCTGATGTGTTAATT
ATCAGCACCAATGTGTTGAATAAACTTGGTGATAAAGAGCGCACGGCATTATTAAAAGCAGCCGATGAGTCCATGATGCA
GATGAAGGACGTCATCTGGCCTGCGGCTGAAAAAGAAGCCTACGACAAAATGAAAGGGATGAACGCAACAGTTGTTGATG
TTGATAAATCCGCTTTCAAAGAACGCGTCAAACCGTTATACGATGAATTCAAGGCGAAAGATGCACAATCCGCCAAAAAC
CTTGAGCAAGTAGAAAGTATGTAA

Upstream 100 bases:

>100_bases
AATATTCCATTATCTGGCAGAGAATTAATTACTACTTTTTATTATAACGATAGAAAAGCGCTGTATTTATCGTTTCTGTT
ATATTAACCAGGAGCAGGAT

Downstream 100 bases:

>100_bases
CCCTAATGGGCAGGTAATTCCTGCCCTTTCATGGAAAACTTATGCGAACACTCACTCATATTCTTAATAAGATCCTTGCC
GGATGTTGCTGCATTATTCT

Product: c4-dicarboxylate transport system binding protein; secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGELVIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYRVLQSDLGKKILKSSESKGFVGITYYDGGARSFYANKPITK
PEDLAGMKIRVQQSPSAIAMMKALGGVATPMAQGELYTALQQGVVDGGENSTVVYSDMRHAEVAKIYSRDEHTMVPDVLI
ISTNVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFKERVKPLYDEFKAKDAQSAKN
LEQVESM

Sequences:

>Translated_327_residues
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGELVIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYRVLQSDLGKKILKSSESKGFVGITYYDGGARSFYANKPITK
PEDLAGMKIRVQQSPSAIAMMKALGGVATPMAQGELYTALQQGVVDGGENSTVVYSDMRHAEVAKIYSRDEHTMVPDVLI
ISTNVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFKERVKPLYDEFKAKDAQSAKN
LEQVESM
>Mature_327_residues
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGELVIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYRVLQSDLGKKILKSSESKGFVGITYYDGGARSFYANKPITK
PEDLAGMKIRVQQSPSAIAMMKALGGVATPMAQGELYTALQQGVVDGGENSTVVYSDMRHAEVAKIYSRDEHTMVPDVLI
ISTNVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFKERVKPLYDEFKAKDAQSAKN
LEQVESM

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=320, Percent_Identity=26.875, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36228; Mature: 36228

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGE
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCE
LVIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYR
EEEEECCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHCCCCCHHHCCCHHHCCCHHHHH
VLQSDLGKKILKSSESKGFVGITYYDGGARSFYANKPITKPEDLAGMKIRVQQSPSAIAM
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEECCCHHHHH
MKALGGVATPMAQGELYTALQQGVVDGGENSTVVYSDMRHAEVAKIYSRDEHTMVPDVLI
HHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEE
ISTNVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFK
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCHHHHH
ERVKPLYDEFKAKDAQSAKNLEQVESM
HHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGE
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCE
LVIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYR
EEEEECCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHCCCCCHHHCCCHHHCCCHHHHH
VLQSDLGKKILKSSESKGFVGITYYDGGARSFYANKPITKPEDLAGMKIRVQQSPSAIAM
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEECCCHHHHH
MKALGGVATPMAQGELYTALQQGVVDGGENSTVVYSDMRHAEVAKIYSRDEHTMVPDVLI
HHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEE
ISTNVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFK
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCHHHHH
ERVKPLYDEFKAKDAQSAKNLEQVESM
HHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]