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The map label for this gene is yqhH [H]

Identifier: 218550262

GI number: 218550262

Start: 3020782

End: 3021042

Strand: Direct

Name: yqhH [H]

Synonym: EFER_2954

Alternate gene names: 218550262

Gene position: 3020782-3021042 (Clockwise)

Preceding gene: 218550261

Following gene: 218550264

Centisome position: 65.83

GC content: 43.3

Gene sequence:

>261_bases
ATGAAAAAGATTTTCACTATAGGATCGATACTATTACTCAGCAGCCTGCTTAGTGGCTGTGTCAATGAAGCGAAAGTTAA
TCAACTTGCCACCAATGTTCAACTGCTAAATACCAAAATCACCAGGCTTGAGCAGGATATTAAAGCGTTACGCCCGCAAA
TCTACGCGGCAAAATCTGAAGCCAACCGAGCAAATACCCGTCTTGATGCCCAGGACTATTTCGATTGCTTGCGCTGCTTG
CGTATGTATTCAGACTACTAA

Upstream 100 bases:

>100_bases
TTAAACCGTTTTTTCTATCTGTGGAGAAAACGGTTTTAAACCGTATTTAATACCGCAATAAATAGATTCATCAAAAAAAT
GGATTATGAGGGAACAATAA

Downstream 100 bases:

>100_bases
AAAACTAAATTTGTATTCCCGGTAACATTTCTGCTACCGGGAATAGTTAATTAACGACCTGTCGCTACTTTAGGGCGTTT
CTTCGCACCAGCATTCACCG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKKIFTIGSILLLSSLLSGCVNEAKVNQLATNVQLLNTKITRLEQDIKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYSDY

Sequences:

>Translated_86_residues
MKKIFTIGSILLLSSLLSGCVNEAKVNQLATNVQLLNTKITRLEQDIKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYSDY
>Mature_86_residues
MKKIFTIGSILLLSSLLSGCVNEAKVNQLATNVQLLNTKITRLEQDIKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYSDY

Specific function: Unknown

COG id: COG4238

COG function: function code M; Murein lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789390, Length=85, Percent_Identity=81.1764705882353, Blast_Score=149, Evalue=3e-38,
Organism=Escherichia coli, GI1787967, Length=65, Percent_Identity=46.1538461538462, Blast_Score=69, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016367
- InterPro:   IPR023147 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9787; Mature: 9787

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFTIGSILLLSSLLSGCVNEAKVNQLATNVQLLNTKITRLEQDIKALRPQIYAAKSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRANTRLDAQDYFDCLRCLRMYSDY
HHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIFTIGSILLLSSLLSGCVNEAKVNQLATNVQLLNTKITRLEQDIKALRPQIYAAKSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRANTRLDAQDYFDCLRCLRMYSDY
HHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]