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The map label for this gene is ygdB [H]

Identifier: 218550072

GI number: 218550072

Start: 2822892

End: 2823296

Strand: Reverse

Name: ygdB [H]

Synonym: EFER_2757

Alternate gene names: 218550072

Gene position: 2823296-2822892 (Counterclockwise)

Preceding gene: 218550073

Following gene: 218550071

Centisome position: 61.53

GC content: 53.09

Gene sequence:

>405_bases
GTGAATCGTGAACGGGGAGTCTCGTCGCTGGGCTTAGTCTTGTTATTGCTGATCCTCGGTAGCTTACTGCTTCAGGGGCT
AAATCAGCAGGAGCGCAGCTACTCTGCACGCGTCGCGCTGGAAAGTCAGGCATTAAAACGTCAGGCAATCGTACAGTCAG
CACTGGAGTGGGGGAAATCGCAACACTGGCCACTGCAACATGACGCTCAGTGCCAGAGATATCAGCAACTCGCGGTGGTC
TGTCTGCGCCTGTTAGCGAATGATGAGGCTGTGCTTATCGCTCAGTACTCTGGCGTCTCTTTATGGCAAATGGCAGCGAG
AGAAAATAATAGCGTCACCTTCTCGGCAACCGGCTGGAGCGATTTCTGTCCATTAAAAGAGGAGGCGCTATGCAACATTC
CCTGA

Upstream 100 bases:

>100_bases
ACGGTTTCGCTCCACTTCTCACCGTGCGATTACGTGGTGCCAGTAAAAACAAACCACAGCACAGTACAGAGGCGCAATAC
AGCGTGACGGGGTTTAATTT

Downstream 100 bases:

>100_bases
AAAGCCAACGGGGATTCAGCTTGCCGGAAGTGATTGTGGCGATGGTATTAATGGTCATGATTGTGACGGCATTGTCTGGT
TATCAGCGAGCACTGATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNRERGVSSLGLVLLLLILGSLLLQGLNQQERSYSARVALESQALKRQAIVQSALEWGKSQHWPLQHDAQCQRYQQLAVV
CLRLLANDEAVLIAQYSGVSLWQMAARENNSVTFSATGWSDFCPLKEEALCNIP

Sequences:

>Translated_134_residues
MNRERGVSSLGLVLLLLILGSLLLQGLNQQERSYSARVALESQALKRQAIVQSALEWGKSQHWPLQHDAQCQRYQQLAVV
CLRLLANDEAVLIAQYSGVSLWQMAARENNSVTFSATGWSDFCPLKEEALCNIP
>Mature_134_residues
MNRERGVSSLGLVLLLLILGSLLLQGLNQQERSYSARVALESQALKRQAIVQSALEWGKSQHWPLQHDAQCQRYQQLAVV
CLRLLANDEAVLIAQYSGVSLWQMAARENNSVTFSATGWSDFCPLKEEALCNIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082164, Length=135, Percent_Identity=62.2222222222222, Blast_Score=140, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019652 [H]

Pfam domain/function: PF10713 DUF2509 [H]

EC number: NA

Molecular weight: Translated: 14954; Mature: 14954

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRERGVSSLGLVLLLLILGSLLLQGLNQQERSYSARVALESQALKRQAIVQSALEWGKS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QHWPLQHDAQCQRYQQLAVVCLRLLANDEAVLIAQYSGVSLWQMAARENNSVTFSATGWS
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCEEEEECCCC
DFCPLKEEALCNIP
CCCCCCCCCCCCCC
>Mature Secondary Structure
MNRERGVSSLGLVLLLLILGSLLLQGLNQQERSYSARVALESQALKRQAIVQSALEWGKS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QHWPLQHDAQCQRYQQLAVVCLRLLANDEAVLIAQYSGVSLWQMAARENNSVTFSATGWS
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCEEEEECCCC
DFCPLKEEALCNIP
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503 [H]