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The map label for this gene is stfR [H]

Identifier: 218549992

GI number: 218549992

Start: 2755649

End: 2757430

Strand: Reverse

Name: stfR [H]

Synonym: EFER_2677

Alternate gene names: 218549992

Gene position: 2757430-2755649 (Counterclockwise)

Preceding gene: 218549993

Following gene: 218549991

Centisome position: 60.09

GC content: 50.39

Gene sequence:

>1782_bases
ATGTTCTGGCGAATATCGGGATGGATGGCGCTTTTTATATTTCAGGTGCGACGACAGCACATATCGATGTGGATATTTTT
GCCGGGGAGTCTCATGGCTGAATATTATTCAATTATTACTAACCGGGGAAAAGAACTGGAGGCGGAAGCGCTTGCCAGTG
GTAGCCAGATTATTCTGACACAGTTTGTGGTTGGCGACAGTAATGGCAAACCGCTGAAACCCGATCCGGCACAAACGCAG
CTTGTTAATGAAACCTACCGTGGAGATATTGCAGAGCTGGTGGTATCACCGGAACAGCCGACACAGCTCATGGCCAGAAT
TGTGCTACCAACGGGAACGGGAGGTTTTACAGTCCGCGAAGTGGGACTGATGACTGATGGAGGGGAATTGTATGCCGTGG
CGAACTGCCCGGCGATTGACAAACCGGTTGGCGGTGTCAGTGTCAATATGCAGTTCCGGCTTGCTGTATCTGACACCTCA
AACATCACGTTAAATGTGGCAACGGGAGACGGACTTTTTCTGCGCATTGACCAGAACCTGAAGGAAATAAAAGCGCGCGG
AGCTGGCGCGCAAAAAGAATCCCGCGAGTCTCTTGGTGTTCTGGATGCCACGACTAAGCAAAAAGGTCTGGTGCAACTGA
ACAGTGCGGTGAACAGCACCAGTGAGACACAGGCAGCGACATCAAAGGCGGTTAAGACAGCATATGACCTTGCTGATGGC
AAATACACTGCACAGGACGCCACCACGGCACGAAAAGGGATTGTTCAGTTAAGCAGCGCCACTAACAGTGACTCTGAAAC
GCTTGCCGCGACTCCGAAAGCAGTGAAAGCTGCTAATGACAATGCAAACGGGCGTGTGCCCTCAGGACGTAAGGTTAATG
GTCACGCGCTGTCATCTGACATTAAGTTATCACCTGAAGATGTAAATGCTTTTTCTCTTGGGTGTACAGGTCAGTATCCG
AGTTCAGATGGTGGGGTGCCATGGAACGCAAAAAGCGGTCTTTACAATGTCATGGACGGCGGCGCTTCATATATCGTTGC
TCATTTTTTTAGTGGTGTAGGGAGTTGCCGGTCATTTCAGCTACGTGCGGATTATAAAAACAGAGGGCTTTATTACCGCT
CATCCCGTGATGGGTATGGATTTGAACGGGGATTTGAACCTGTTAATGCTTTTCCTGTGGGGGCACCAATAGCCTGGCCT
TCGGACATAGTTCCGGAAGGTTATGCGATTATGCAGGGGCAGACTTTTGACAAGGCTGCCTATCCCCTGCTTGCAGCAGC
TTACCCATCTGGTGTGATCCCTGATATGCGTGGCTGGACAATTAAGGGCAAACCCGCCAGTGGTCGCGCTGTATTGTCTC
AGGAACAGGACGGCATTAAATCGCATACCCACAGTGCCAGTGCATCCAGTACGGATTTGGGTACGAAAACAACCAGTTCG
TTTGATTACGGGACAAAAACAGTCAGCACGTTTAACCACGGCACAAAAACGACAAACAATACAGGAGCGCATACGCACAC
TGTCGGTGGTCGTTACGGTGGTGACTCCATTGGGGGTAAACAACGTGTTCAGGTGTCAGGAACCAACCAGGTGTCAAGCT
CTGACGGAGCACACGCCCATACAGTCGATATTGGTCAGCATAACCACACCGTAGGTATTGGTGCCCATGCACACACTGTG
GCGCTGGGTGCACATGGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACCGTCAAAAACATCGCATTTAA
CTATATTGTGAGGCTTGCATAA

Upstream 100 bases:

>100_bases
GAAGTTCACAGCAGTCAGGGCGTCAGCGATGCACTGTATCACCAGATTCGTCAGCTTACTGACCGGGCTAAAAACCTGCG
CAGTCATCTGAGCAAAATAG

Downstream 100 bases:

>100_bases
TGGCATTCAGAATGAGTGAACAACCACGGACTATAAAAATTTATAATCTGCTGGCCGGAACCAATGAATTTATTGGTGAA
GGTGATGCATACATTCCCCC

Product: tail fiber protein (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MFWRISGWMALFIFQVRRQHISMWIFLPGSLMAEYYSIITNRGKELEAEALASGSQIILTQFVVGDSNGKPLKPDPAQTQ
LVNETYRGDIAELVVSPEQPTQLMARIVLPTGTGGFTVREVGLMTDGGELYAVANCPAIDKPVGGVSVNMQFRLAVSDTS
NITLNVATGDGLFLRIDQNLKEIKARGAGAQKESRESLGVLDATTKQKGLVQLNSAVNSTSETQAATSKAVKTAYDLADG
KYTAQDATTARKGIVQLSSATNSDSETLAATPKAVKAANDNANGRVPSGRKVNGHALSSDIKLSPEDVNAFSLGCTGQYP
SSDGGVPWNAKSGLYNVMDGGASYIVAHFFSGVGSCRSFQLRADYKNRGLYYRSSRDGYGFERGFEPVNAFPVGAPIAWP
SDIVPEGYAIMQGQTFDKAAYPLLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSS
FDYGTKTVSTFNHGTKTTNNTGAHTHTVGGRYGGDSIGGKQRVQVSGTNQVSSSDGAHAHTVDIGQHNHTVGIGAHAHTV
ALGAHGHTITVNAAGNAENTVKNIAFNYIVRLA

Sequences:

>Translated_593_residues
MFWRISGWMALFIFQVRRQHISMWIFLPGSLMAEYYSIITNRGKELEAEALASGSQIILTQFVVGDSNGKPLKPDPAQTQ
LVNETYRGDIAELVVSPEQPTQLMARIVLPTGTGGFTVREVGLMTDGGELYAVANCPAIDKPVGGVSVNMQFRLAVSDTS
NITLNVATGDGLFLRIDQNLKEIKARGAGAQKESRESLGVLDATTKQKGLVQLNSAVNSTSETQAATSKAVKTAYDLADG
KYTAQDATTARKGIVQLSSATNSDSETLAATPKAVKAANDNANGRVPSGRKVNGHALSSDIKLSPEDVNAFSLGCTGQYP
SSDGGVPWNAKSGLYNVMDGGASYIVAHFFSGVGSCRSFQLRADYKNRGLYYRSSRDGYGFERGFEPVNAFPVGAPIAWP
SDIVPEGYAIMQGQTFDKAAYPLLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSS
FDYGTKTVSTFNHGTKTTNNTGAHTHTVGGRYGGDSIGGKQRVQVSGTNQVSSSDGAHAHTVDIGQHNHTVGIGAHAHTV
ALGAHGHTITVNAAGNAENTVKNIAFNYIVRLA
>Mature_593_residues
MFWRISGWMALFIFQVRRQHISMWIFLPGSLMAEYYSIITNRGKELEAEALASGSQIILTQFVVGDSNGKPLKPDPAQTQ
LVNETYRGDIAELVVSPEQPTQLMARIVLPTGTGGFTVREVGLMTDGGELYAVANCPAIDKPVGGVSVNMQFRLAVSDTS
NITLNVATGDGLFLRIDQNLKEIKARGAGAQKESRESLGVLDATTKQKGLVQLNSAVNSTSETQAATSKAVKTAYDLADG
KYTAQDATTARKGIVQLSSATNSDSETLAATPKAVKAANDNANGRVPSGRKVNGHALSSDIKLSPEDVNAFSLGCTGQYP
SSDGGVPWNAKSGLYNVMDGGASYIVAHFFSGVGSCRSFQLRADYKNRGLYYRSSRDGYGFERGFEPVNAFPVGAPIAWP
SDIVPEGYAIMQGQTFDKAAYPLLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSS
FDYGTKTVSTFNHGTKTTNNTGAHTHTVGGRYGGDSIGGKQRVQVSGTNQVSSSDGAHAHTVDIGQHNHTVGIGAHAHTV
ALGAHGHTITVNAAGNAENTVKNIAFNYIVRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=361, Percent_Identity=59.8337950138504, Blast_Score=373, Evalue=1e-104,
Organism=Escherichia coli, GI1787829, Length=242, Percent_Identity=63.6363636363636, Blast_Score=260, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 62719; Mature: 62719

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWRISGWMALFIFQVRRQHISMWIFLPGSLMAEYYSIITNRGKELEAEALASGSQIILT
CEEEEHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEE
QFVVGDSNGKPLKPDPAQTQLVNETYRGDIAELVVSPEQPTQLMARIVLPTGTGGFTVRE
EEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHEEECCCCHHHEEEEEEEECCCCCEEEEE
VGLMTDGGELYAVANCPAIDKPVGGVSVNMQFRLAVSDTSNITLNVATGDGLFLRIDQNL
EEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCEEEEECCCH
KEIKARGAGAQKESRESLGVLDATTKQKGLVQLNSAVNSTSETQAATSKAVKTAYDLADG
HHHHHCCCCCCHHHHHHCCEEECCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHCCCC
KYTAQDATTARKGIVQLSSATNSDSETLAATPKAVKAANDNANGRVPSGRKVNGHALSSD
CEECCHHHHHHHCEEEEECCCCCCCCEEECCCHHHEECCCCCCCCCCCCCCCCCEEECCC
IKLSPEDVNAFSLGCTGQYPSSDGGVPWNAKSGLYNVMDGGASYIVAHFFSGVGSCRSFQ
CEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCEEEE
LRADYKNRGLYYRSSRDGYGFERGFEPVNAFPVGAPIAWPSDIVPEGYAIMQGQTFDKAA
EEECCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHH
YPLLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSS
CCHHEECCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCCCCC
FDYGTKTVSTFNHGTKTTNNTGAHTHTVGGRYGGDSIGGKQRVQVSGTNQVSSSDGAHAH
CCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE
TVDIGQHNHTVGIGAHAHTVALGAHGHTITVNAAGNAENTVKNIAFNYIVRLA
EEECCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCHHHHHHHEEEEEEEEC
>Mature Secondary Structure
MFWRISGWMALFIFQVRRQHISMWIFLPGSLMAEYYSIITNRGKELEAEALASGSQIILT
CEEEEHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEE
QFVVGDSNGKPLKPDPAQTQLVNETYRGDIAELVVSPEQPTQLMARIVLPTGTGGFTVRE
EEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHEEECCCCHHHEEEEEEEECCCCCEEEEE
VGLMTDGGELYAVANCPAIDKPVGGVSVNMQFRLAVSDTSNITLNVATGDGLFLRIDQNL
EEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCEEEEECCCH
KEIKARGAGAQKESRESLGVLDATTKQKGLVQLNSAVNSTSETQAATSKAVKTAYDLADG
HHHHHCCCCCCHHHHHHCCEEECCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHCCCC
KYTAQDATTARKGIVQLSSATNSDSETLAATPKAVKAANDNANGRVPSGRKVNGHALSSD
CEECCHHHHHHHCEEEEECCCCCCCCEEECCCHHHEECCCCCCCCCCCCCCCCCEEECCC
IKLSPEDVNAFSLGCTGQYPSSDGGVPWNAKSGLYNVMDGGASYIVAHFFSGVGSCRSFQ
CEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCEEEE
LRADYKNRGLYYRSSRDGYGFERGFEPVNAFPVGAPIAWPSDIVPEGYAIMQGQTFDKAA
EEECCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHH
YPLLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSS
CCHHEECCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCCCCC
FDYGTKTVSTFNHGTKTTNNTGAHTHTVGGRYGGDSIGGKQRVQVSGTNQVSSSDGAHAH
CCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE
TVDIGQHNHTVGIGAHAHTVALGAHGHTITVNAAGNAENTVKNIAFNYIVRLA
EEECCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCHHHHHHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]