| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is ybgE [H]
Identifier: 218549692
GI number: 218549692
Start: 2423190
End: 2423483
Strand: Reverse
Name: ybgE [H]
Synonym: EFER_2369
Alternate gene names: 218549692
Gene position: 2423483-2423190 (Counterclockwise)
Preceding gene: 218549693
Following gene: 218549691
Centisome position: 52.81
GC content: 49.66
Gene sequence:
>294_bases ATGAGCAAGATTATCGCAACCTTGTATGCGGTAATGGACAAGCGCCCCCAGCGGGCGCTTTCCTTCGTGATGGCGCTTCT GTTAGCAGGATGTATGTTTTGGGACCCGTCACGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGC TGATGTGGGCTGTCTGTGCTGGTGTAATTCACGGCGTAGGCTTTCGTCCGCAGAAGGTTCTCTGGCAAGGGATTTTTTGC CCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAA
Upstream 100 bases:
>100_bases CATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAGCACGTCGAATCAGGCAAA GCCGGTCAAGAAGACATCTG
Downstream 100 bases:
>100_bases ATGAGAATTCTCTTCAAAAATTTATGGGCCACAGAAGGTCCATAAATTTTTACGCTCCCTTAACTTGCCCTCATTCCCAA ACCTCAATCGCGCGCGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSKIIATLYAVMDKRPQRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFC PLLADIVLIVGLIFFFF
Sequences:
>Translated_97_residues MSKIIATLYAVMDKRPQRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFC PLLADIVLIVGLIFFFF >Mature_96_residues SKIIATLYAVMDKRPQRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCP LLADIVLIVGLIFFFF
Specific function: Unknown
COG id: COG3790
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786956, Length=97, Percent_Identity=98.9690721649485, Blast_Score=192, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011846 [H]
Pfam domain/function: PF09600 Cyd_oper_YbgE [H]
EC number: NA
Molecular weight: Translated: 10947; Mature: 10816
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIATLYAVMDKRPQRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCA CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SKIIATLYAVMDKRPQRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]