Click here to switch to the map view.

The map label for this gene is ybhQ

Identifier: 218549642

GI number: 218549642

Start: 2377168

End: 2377578

Strand: Reverse

Name: ybhQ

Synonym: EFER_2317

Alternate gene names: 218549642

Gene position: 2377578-2377168 (Counterclockwise)

Preceding gene: 218549646

Following gene: 218549636

Centisome position: 51.81

GC content: 52.31

Gene sequence:

>411_bases
ATGAAGTGGCAACAACGTGTTCGTGTCGCAACTGGTCTAAGTTGCTGGCAGATTATGTTGCATTTACTGGTAGTGGCGCT
GCTGGTGGTGGGCTGGATGAGTAAAACTCTGGTTCACGTTGGCGTAGGATTATGCGCACTGTATTGTGTCACGGTAGTGA
TGATGCTGGTGTTTCAGCGCCACCCCGAGCAACGCTGGCGTGAGGTGGCAGATGTGCTGGAAGAACTGACCACAACCTGG
TATTTTGGCGCAGCGCTGATTGTGCTGTGGCTGTTATCCCGCGTACTGGAAAACAACTTTTTGCTGGCGATTGCAGGGCT
GGCGATCCTTGCTGGCCCGGCAGTAGTGTCTTTACTGGCGAAAGATAAGAAGTTACATCACCTTACGTCTAAACATCGCG
TACGCCGCTGA

Upstream 100 bases:

>100_bases
AATAGTGTAGTCGGCGTCACAAAAAGATGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATA
AATTCTTCAGGAGAGAAGCC

Downstream 100 bases:

>100_bases
CCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAATCT
GCTTGGTAATGTCCGTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTW
YFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR

Sequences:

>Translated_136_residues
MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTW
YFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR
>Mature_136_residues
MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTW
YFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787009, Length=136, Percent_Identity=100, Blast_Score=270, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBHQ_ECO57 (P0AAW7)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E90737
- PIR:   F85587
- RefSeq:   NP_286554.1
- RefSeq:   NP_308896.1
- ProteinModelPortal:   P0AAW7
- EnsemblBacteria:   EBESCT00000027195
- EnsemblBacteria:   EBESCT00000059296
- GeneID:   917607
- GeneID:   958014
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1010
- KEGG:   ecs:ECs0869
- GeneTree:   EBGT00050000010160
- HOGENOM:   HBG416447
- OMA:   LVMGWMS
- ProtClustDB:   CLSK879767
- BioCyc:   ECOL83334:ECS0869-MONOMER
- InterPro:   IPR021303

Pfam domain/function: PF11076 YbhQ

EC number: NA

Molecular weight: Translated: 15465; Mature: 15465

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2aafca68)-; HASH(0x2a30a0a8)-; HASH(0x2a76d950)-; HASH(0x2a4873b4)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQR
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KDKKLHHLTSKHRVRR
HHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQR
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KDKKLHHLTSKHRVRR
HHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796