| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is rhlE [H]
Identifier: 218549636
GI number: 218549636
Start: 2369972
End: 2371336
Strand: Reverse
Name: rhlE [H]
Synonym: EFER_2311
Alternate gene names: 218549636
Gene position: 2371336-2369972 (Counterclockwise)
Preceding gene: 218549642
Following gene: 218549634
Centisome position: 51.68
GC content: 55.9
Gene sequence:
>1365_bases ATGTCTTTCGATTCTTTGGGGTTAAGCCCTGATATCTTGCGCGCCGTTGCCGAGCAAGGTTACCGTGAACCCACCCCTAT TCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACTGGCAAAACAGCGG GCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTCCGTGCGCTCATT CTTACCCCAACCCGTGAACTGGCTGCACAGATTGGCGAAAACGTCCGTGATTACAGCAAATACCTGAATATTCGTTCGCT GGTGGTGTTTGGCGGCGTCAGCATCAACCCGCAGATGATGAAGCTGCGTGGCGGCGTTGATGTGCTGGTGGCAACGCCGG GACGTCTGCTGGACCTGGAACATCAGAATGCAGTGAAGCTGGACCAGATAGAAATCCTGGTCCTCGATGAAGCTGACCGT ATGCTCGACATGGGCTTTATCCACGATATCCGTCGTGTGTTGACTAAGCTGCCAGCGAAGCGCCAGAACCTGTTGTTCTC CGCCACTTTCTCAGACGATATTAAAAACCTGGCGGAAAAACTGCTGCACAACCCGCTGGAAATCGAAGTGGCACGCCGCA ATACCGCGTCTGATCAGGTGACCCAGCATGTTCACTTTGTTGATAAAAAACGCAAACGCGAATTGCTGTCGCACATGATT GGGAAAGGGAACTGGCAGCAGGTGCTGGTGTTTACCCGTACTAAACACGGCGCTAACCATCTGGCGGAACAGCTCAATAA AGATGGCATCCGTAGTGCGGCGATCCACGGTAATAAATCGCAAGGTGCGCGTACTCGTGCGCTGGCCGATTTTAAATCGG GCGATATTCGTGTTCTGGTGGCAACTGACATCGCTGCACGCGGTCTGGATATCGAAGAGTTGCCGCACGTCGTCAACTAT GAACTGCCAAACGTACCGGAAGATTACGTCCACCGTATCGGGCGTACCGGTCGTGCAGCGGCAACTGGTGAAGCGTTATC GCTGGTGTGTGTGGATGAACACAAACTTCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATTCCACGCATTGCGATTC CGGGTTATGAGCCGGACCCGTCAATCAAAGCCGAACCGATCCAGAACGGTCGCCAGCAACGTGGCGGCGGCGGTCGTGGG CAAGGTGGTGGTCGCGGTCAACAGCAACCACGCCGTGGAGAAGGTGGCTCAAAATCTGCAAGCGCAAAACCTGCAGAAAA ACCGTCTCGTCGTCTCGGCGATGCCAAACCGGCAGGCGAGCAACAACGCCGTCGCCGTCCGCGTAAACCTGCCGCTGCGC AGTAA
Upstream 100 bases:
>100_bases TACACTCCGCCCCCTCATGACATTGTGGTTTTTGTCATTTTCCTTTTCAGTATCTCCCTGAAAACTACACCGGTAACGGT CGGGGCGGTTCGGAGTAGTT
Downstream 100 bases:
>100_bases TCTTTAATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTA CGTGAACTCTGCAATATATT
Product: ATP-dependent RNA helicase RhlE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALI LTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADR MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKNLAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNY ELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG QGGGRGQQQPRRGEGGSKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ
Sequences:
>Translated_454_residues MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALI LTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADR MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKNLAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNY ELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG QGGGRGQQQPRRGEGGSKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ >Mature_453_residues SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALIL TPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRM LDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKNLAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG KGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYE LPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQ GGGRGQQQPRRGEGGSKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=42.159383033419, Blast_Score=279, Evalue=3e-75, Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=42.159383033419, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI41327773, Length=379, Percent_Identity=39.3139841688654, Blast_Score=278, Evalue=6e-75, Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=42.159383033419, Blast_Score=278, Evalue=6e-75, Organism=Homo sapiens, GI262118318, Length=395, Percent_Identity=40, Blast_Score=278, Evalue=6e-75, Organism=Homo sapiens, GI169881239, Length=389, Percent_Identity=42.159383033419, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI13514809, Length=389, Percent_Identity=42.159383033419, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI216548263, Length=395, Percent_Identity=40, Blast_Score=278, Evalue=8e-75, Organism=Homo sapiens, GI13518015, Length=395, Percent_Identity=40, Blast_Score=278, Evalue=8e-75, Organism=Homo sapiens, GI262231852, Length=395, Percent_Identity=40, Blast_Score=278, Evalue=8e-75, Organism=Homo sapiens, GI224593278, Length=381, Percent_Identity=40.1574803149606, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=41.1458333333333, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI55749865, Length=365, Percent_Identity=38.6301369863014, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI222352149, Length=366, Percent_Identity=39.0710382513661, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI4758138, Length=371, Percent_Identity=36.9272237196765, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI148613856, Length=371, Percent_Identity=37.466307277628, Blast_Score=262, Evalue=4e-70, Organism=Homo sapiens, GI38201710, Length=371, Percent_Identity=37.466307277628, Blast_Score=262, Evalue=4e-70, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=37.8666666666667, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=37.8666666666667, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=38.1578947368421, Blast_Score=258, Evalue=8e-69, Organism=Homo sapiens, GI41327771, Length=393, Percent_Identity=35.8778625954198, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=36.1413043478261, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI188035877, Length=370, Percent_Identity=39.1891891891892, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI164419743, Length=378, Percent_Identity=35.978835978836, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI51094101, Length=378, Percent_Identity=35.978835978836, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI20149629, Length=371, Percent_Identity=35.3099730458221, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=33.7837837837838, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI38569505, Length=363, Percent_Identity=34.9862258953168, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI38569503, Length=363, Percent_Identity=34.9862258953168, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=33.0645161290323, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=32.5268817204301, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI41327776, Length=371, Percent_Identity=33.1536388140162, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI38327634, Length=368, Percent_Identity=34.2391304347826, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=32.7868852459016, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI4758112, Length=387, Percent_Identity=32.2997416020672, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI18375623, Length=387, Percent_Identity=32.2997416020672, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI50659095, Length=401, Percent_Identity=32.1695760598504, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=32.258064516129, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=32.2997416020672, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=35.230352303523, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI13514831, Length=372, Percent_Identity=33.6021505376344, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=30.2663438256659, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=33.8192419825073, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=32.3759791122715, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=32.3759791122715, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI256223453, Length=373, Percent_Identity=30.8310991957105, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI164419732, Length=377, Percent_Identity=31.2997347480106, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=32.0547945205479, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI154759257, Length=465, Percent_Identity=29.0322580645161, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=31.9767441860465, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI9966805, Length=330, Percent_Identity=30.9090909090909, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=30.690537084399, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=37.2093023255814, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI1787016, Length=454, Percent_Identity=99.3392070484581, Blast_Score=912, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=41.1140583554377, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1790214, Length=413, Percent_Identity=38.0145278450363, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI1788930, Length=356, Percent_Identity=39.3258426966292, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1787605, Length=386, Percent_Identity=38.60103626943, Blast_Score=238, Evalue=5e-64, Organism=Caenorhabditis elegans, GI71995514, Length=385, Percent_Identity=42.0779220779221, Blast_Score=284, Evalue=6e-77, Organism=Caenorhabditis elegans, GI17510309, Length=385, Percent_Identity=42.0779220779221, Blast_Score=284, Evalue=6e-77, Organism=Caenorhabditis elegans, GI17510307, Length=385, Percent_Identity=42.0779220779221, Blast_Score=284, Evalue=6e-77, Organism=Caenorhabditis elegans, GI32565321, Length=393, Percent_Identity=38.676844783715, Blast_Score=270, Evalue=1e-72, Organism=Caenorhabditis elegans, GI115533224, Length=392, Percent_Identity=38.5204081632653, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI86570094, Length=418, Percent_Identity=36.8421052631579, Blast_Score=258, Evalue=6e-69, Organism=Caenorhabditis elegans, GI17510559, Length=390, Percent_Identity=37.4358974358974, Blast_Score=257, Evalue=9e-69, Organism=Caenorhabditis elegans, GI71995718, Length=387, Percent_Identity=39.0180878552972, Blast_Score=256, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=34.5013477088949, Blast_Score=251, Evalue=6e-67, Organism=Caenorhabditis elegans, GI71995724, Length=368, Percent_Identity=36.6847826086957, Blast_Score=250, Evalue=9e-67, Organism=Caenorhabditis elegans, GI17507121, Length=368, Percent_Identity=36.4130434782609, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17537549, Length=383, Percent_Identity=37.0757180156658, Blast_Score=248, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=34.5013477088949, Blast_Score=247, Evalue=8e-66, Organism=Caenorhabditis elegans, GI17555296, Length=368, Percent_Identity=36.9565217391304, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17507945, Length=374, Percent_Identity=37.4331550802139, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=36.2903225806452, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=36.8563685636856, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17552642, Length=440, Percent_Identity=32.9545454545455, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=34.6354166666667, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=32.8804347826087, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=32.8804347826087, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI115532548, Length=381, Percent_Identity=34.1207349081365, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI115532546, Length=381, Percent_Identity=34.1207349081365, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17509811, Length=374, Percent_Identity=32.620320855615, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17505370, Length=367, Percent_Identity=36.5122615803815, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI71982858, Length=351, Percent_Identity=31.9088319088319, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71990816, Length=404, Percent_Identity=31.9306930693069, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI193208216, Length=421, Percent_Identity=30.6413301662708, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=29.2105263157895, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI193206561, Length=352, Percent_Identity=30.6818181818182, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17536103, Length=405, Percent_Identity=30.1234567901235, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17536101, Length=405, Percent_Identity=30.1234567901235, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=30.1745635910224, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=25.8373205741627, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17556951, Length=379, Percent_Identity=29.287598944591, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=28.6821705426357, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=28.9156626506024, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=26.8156424581006, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=28.6096256684492, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=33.1707317073171, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=24.2690058479532, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71997889, Length=378, Percent_Identity=26.4550264550265, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17557982, Length=374, Percent_Identity=25.668449197861, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=39.5833333333333, Blast_Score=85, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6325138, Length=388, Percent_Identity=41.2371134020619, Blast_Score=286, Evalue=4e-78, Organism=Saccharomyces cerevisiae, GI6324778, Length=392, Percent_Identity=40.0510204081633, Blast_Score=285, Evalue=1e-77, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=40.0568181818182, Blast_Score=266, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6321360, Length=364, Percent_Identity=41.2087912087912, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=35.3099730458221, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=38.5026737967914, Blast_Score=256, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=374, Percent_Identity=35.2941176470588, Blast_Score=246, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6323021, Length=358, Percent_Identity=36.3128491620112, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=33.5038363171356, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=34.0540540540541, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=34.0540540540541, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=362, Percent_Identity=33.7016574585635, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6324620, Length=359, Percent_Identity=35.933147632312, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6319714, Length=441, Percent_Identity=30.3854875283447, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=383, Percent_Identity=30.8093994778068, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=33.1578947368421, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320173, Length=431, Percent_Identity=31.0904872389791, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=373, Percent_Identity=30.5630026809651, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=385, Percent_Identity=30.9090909090909, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319618, Length=426, Percent_Identity=29.3427230046948, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=414, Percent_Identity=31.1594202898551, Blast_Score=166, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=349, Percent_Identity=30.6590257879656, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=27.2506082725061, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=423, Percent_Identity=29.5508274231678, Blast_Score=140, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=360, Percent_Identity=25, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=247, Percent_Identity=27.1255060728745, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI17985987, Length=394, Percent_Identity=41.8781725888325, Blast_Score=279, Evalue=4e-75, Organism=Drosophila melanogaster, GI24642151, Length=365, Percent_Identity=38.9041095890411, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=41.5472779369628, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=38.1962864721485, Blast_Score=271, Evalue=6e-73, Organism=Drosophila melanogaster, GI21355075, Length=366, Percent_Identity=38.5245901639344, Blast_Score=271, Evalue=9e-73, Organism=Drosophila melanogaster, GI17977678, Length=381, Percent_Identity=40.1574803149606, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI24644479, Length=370, Percent_Identity=36.7567567567568, Blast_Score=264, Evalue=8e-71, Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=37.7358490566038, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI24644483, Length=370, Percent_Identity=36.7567567567568, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24644487, Length=370, Percent_Identity=36.7567567567568, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI45551833, Length=370, Percent_Identity=36.7567567567568, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24644485, Length=370, Percent_Identity=36.7567567567568, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI281361218, Length=370, Percent_Identity=36.7567567567568, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24644481, Length=370, Percent_Identity=36.7567567567568, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=37.5, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=38.7267904509284, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI24585582, Length=371, Percent_Identity=37.1967654986523, Blast_Score=251, Evalue=6e-67, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=38.1471389645777, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=37.2282608695652, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24583281, Length=376, Percent_Identity=35.1063829787234, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24583279, Length=376, Percent_Identity=35.1063829787234, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24645031, Length=368, Percent_Identity=34.5108695652174, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=34.2391304347826, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=34.2391304347826, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=34.2391304347826, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=34.2391304347826, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=37.2611464968153, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI17136814, Length=372, Percent_Identity=37.6344086021505, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI28571808, Length=364, Percent_Identity=34.0659340659341, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI28571809, Length=364, Percent_Identity=34.0659340659341, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=31.9672131147541, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=31.9672131147541, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=31.9672131147541, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=33.5135135135135, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=34.2245989304813, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI20130173, Length=429, Percent_Identity=29.3706293706294, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=31.0344827586207, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=28.927680798005, Blast_Score=168, Evalue=9e-42, Organism=Drosophila melanogaster, GI17647335, Length=393, Percent_Identity=27.4809160305344, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=31.0769230769231, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24640164, Length=388, Percent_Identity=28.8659793814433, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI17136666, Length=459, Percent_Identity=27.4509803921569, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI19920478, Length=368, Percent_Identity=29.6195652173913, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI18859659, Length=219, Percent_Identity=36.5296803652968, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI28571338, Length=219, Percent_Identity=36.5296803652968, Blast_Score=140, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50063; Mature: 49932
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCHHHHH QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM HHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHH KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLTKLPAK EECCCCEEEEECCCCEEECCCCCCEEECEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC RQNLLFSATFSDDIKNLAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI HHCEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV CCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCEEEEE ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI EECHHHCCCCHHHCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHH EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGSKSA HHHHHHCCCEEECCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ CCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCHHHHH QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM HHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHH KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLTKLPAK EECCCCEEEEECCCCEEECCCCCCEEECEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC RQNLLFSATFSDDIKNLAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI HHCEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV CCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCEEEEE ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI EECHHHCCCCHHHCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHH EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGSKSA HHHHHHCCCEEECCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ CCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]