| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yehM [H]
Identifier: 218549534
GI number: 218549534
Start: 2260302
End: 2262581
Strand: Direct
Name: yehM [H]
Synonym: EFER_2206
Alternate gene names: 218549534
Gene position: 2260302-2262581 (Clockwise)
Preceding gene: 218549533
Following gene: 218549535
Centisome position: 49.26
GC content: 55.83
Gene sequence:
>2280_bases ATGAGCGAGCCGTTAATTGTCGGCATCCGGCATCATAGTCCGGCCTGCGCCAGGCTGGTGAAATCGTTAATCGAAAGACA GCGGCCACGATACGTGTTGATTGAAGGCCCTGCTGATTTTAATGACCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTC CGGTGGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCTGCCCACGGGCGTGGTGCCTGGACGCCATTTGCTGAATTT TCGCCGGAGTGGCAGGCGCTACAAGCTGCACGTCGTATTCAGGCACAAACTTACTTCATCGATTTGCCTTGCTGGGCGCA GAGTGAAGAAGAGGACGAGTCACCCGGTACGCAAGAGGAAAGCCAGGCTTTGTTGCTGCGTGCCACTCGTATGGATAACA GCGACACCCTGTGGGATCACCTGTTCGAAGATGAAAGCCAGCAACCTGCATTATCCTCTGCACTGGCGCACTATTTTGCC CAACTGCGGGGCGACTCCCCCAGCGATGCGCTCAATCGTCAGCGCGAAGCCTTTATGGCCCACTGGATTGCATGGGCGAT GCAGCAAAACAATGGCGGCGTGTTAGTCGTCTGTGGTGGCTGGCACGCTCCGGCACTGGCAAAAATGTGGCGCGAATGTT TGCAAGAAATGAACAAGCCAGAATTGCCTTCGCTGGCAGATGCCGTTACAGGTTGCTATCTCACGCCATACAGTGAAAAG CGCCTTGATGTGCTGGCAGGATACCTTTCCGGAATGCCAGCCCCGGTCTGGCAAAACTGGTGCTGGCAGTCAGGTTTGCA GCAGGCAGGTGAACAACTACTAAAAACGGTTCTTACCCGTTTGCGCCAGCACAAATTGCCTGCTTCAACAGCGGATATGG CTGCCGCTCATCTGCATGCGATGGCACTGGCACAGTTGCGCGGTCATACACTACCGTTACGCACTGACTGGCTGGATGCT ATAGCAGGCTCGCTGATCAAAGAAGCCCTGAACGCGCCGTTGCCGTGGAGCTATCGCGGCGTTATTCATCCCGATACCGA TCCGATTCTGCTAACGTTGATAGACACATTAGCAGGTGACGGATTCGGTAAACTTGCCCCCTCGACGCCACAGCCACCTC TGCCAAAAGATGTCACCTGCGAACTGGAACGTACCGGAATCTCTCTTCCGGCGGAGCTTACCTTAAATCGCTTTACCCCC GATGGACTGGCGCAAAGTCAGGTGCTACATCGGTTGGCAATACTGGAGATTCCCGGCATTGTGCGCCAGCACGGAAGTAC ACTGACGCTGGCGGGCAACGGTGAAGAACGCTGGACATTAACCCAGCCACTTAGCCAACATGCGGCATTGATTGAAGCCG CCTGCTTTGGTGCCACACTCCAGGAGGCCGCACGGAATAAATTAGAAGCCGATATGCTGGACGCGGGTGGAATCAGCGGC ATCACCACATGTCTTAGCCAGGCAGCGTTAGCGGGTCTGGCGTCCTTCAGTCAGCAATTACTGGAACAACTCACATTATT AATCGCCCAGGAAAATCAGTTTGCCGAAATGGGCCAGGCGCTGGAAGTGCTTTACGCCTTGTGGCAGCTCGATGAAATCA GCGGTATGCAAGGCGCGCAGATATTACAGACGACGTTATACGCGGCTATCGATCGCACGCTGTGGCTATGTGAATCCAAC GGCAGGCCGGATGAGAAGGAGTTTCACGCTCACCTGCATAGCTGGCAGGCGCTTTGCCATATCCTGCGCGATCTAAATAG CGGCGTTAATTTACCCGGCGTTTCGCTTTCTGCGGCGGTAGCCTTACTGGAACGTCGCAGTCAGGCGATTCATCCCCCAG CGCTGGATCGCGGTGCGGCCCTTGGCGCGCTGATGCGTCTGGAACATCCCAACGCCAGTGCCGAAGCGGCGCTGACGATG CTGGCACAATTATCCCCGGCACAATCTGGCGAGGCGCTGCACGGTTTGCTGGCATTAGCCCGCCATCAACTGGCCAGTCA GCCTGCATTTATCGCCGGTTTCAGCAGCCATTTGAATCAACTGAGTGACGCCGATTTTATTAACGCCCTGCCCGATTTGC GCGCGGCGATGGCCTGGCTACCGCCACGAGAACGCGGGACGCTGGCGCATCAGGTGCTTGAGCATTACCAGCTCGCTCAG CTTCCCGTTTCGGCGCTGCAAATGCCGTTGCATTGCCCACCGCAAGCCATTGCACATCATCAACAACTCGAACAGCAGGC ACTGGCATCACTGCAACACTGGGGAGTTTTCCATGTCTGA
Upstream 100 bases:
>100_bases CGTCTTCGCCGTTACTTCGAACAGCGTGTCGCTACACATAAAGAAGCTCACTGGCAGGCTTATTATCAAGCTCGCCACCG CCTGCCGTGAGGAAAGATGC
Downstream 100 bases:
>100_bases ACTGAACGATCTTCTGACCACCCGTGAGCTACAACGCTGGCGATTAATTCTTGGCGAAGCGGCAGAAACGACCCTTTGTG GGCTGGATGACAATACCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MSEPLIVGIRHHSPACARLVKSLIERQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAHGRGAWTPFAEF SPEWQALQAARRIQAQTYFIDLPCWAQSEEEDESPGTQEESQALLLRATRMDNSDTLWDHLFEDESQQPALSSALAHYFA QLRGDSPSDALNRQREAFMAHWIAWAMQQNNGGVLVVCGGWHAPALAKMWRECLQEMNKPELPSLADAVTGCYLTPYSEK RLDVLAGYLSGMPAPVWQNWCWQSGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDA IAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTGISLPAELTLNRFTP DGLAQSQVLHRLAILEIPGIVRQHGSTLTLAGNGEERWTLTQPLSQHAALIEAACFGATLQEAARNKLEADMLDAGGISG ITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWQLDEISGMQGAQILQTTLYAAIDRTLWLCESN GRPDEKEFHAHLHSWQALCHILRDLNSGVNLPGVSLSAAVALLERRSQAIHPPALDRGAALGALMRLEHPNASAEAALTM LAQLSPAQSGEALHGLLALARHQLASQPAFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV
Sequences:
>Translated_759_residues MSEPLIVGIRHHSPACARLVKSLIERQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAHGRGAWTPFAEF SPEWQALQAARRIQAQTYFIDLPCWAQSEEEDESPGTQEESQALLLRATRMDNSDTLWDHLFEDESQQPALSSALAHYFA QLRGDSPSDALNRQREAFMAHWIAWAMQQNNGGVLVVCGGWHAPALAKMWRECLQEMNKPELPSLADAVTGCYLTPYSEK RLDVLAGYLSGMPAPVWQNWCWQSGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDA IAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTGISLPAELTLNRFTP DGLAQSQVLHRLAILEIPGIVRQHGSTLTLAGNGEERWTLTQPLSQHAALIEAACFGATLQEAARNKLEADMLDAGGISG ITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWQLDEISGMQGAQILQTTLYAAIDRTLWLCESN GRPDEKEFHAHLHSWQALCHILRDLNSGVNLPGVSLSAAVALLERRSQAIHPPALDRGAALGALMRLEHPNASAEAALTM LAQLSPAQSGEALHGLLALARHQLASQPAFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV >Mature_758_residues SEPLIVGIRHHSPACARLVKSLIERQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAHGRGAWTPFAEFS PEWQALQAARRIQAQTYFIDLPCWAQSEEEDESPGTQEESQALLLRATRMDNSDTLWDHLFEDESQQPALSSALAHYFAQ LRGDSPSDALNRQREAFMAHWIAWAMQQNNGGVLVVCGGWHAPALAKMWRECLQEMNKPELPSLADAVTGCYLTPYSEKR LDVLAGYLSGMPAPVWQNWCWQSGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAI AGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTGISLPAELTLNRFTPD GLAQSQVLHRLAILEIPGIVRQHGSTLTLAGNGEERWTLTQPLSQHAALIEAACFGATLQEAARNKLEADMLDAGGISGI TTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWQLDEISGMQGAQILQTTLYAAIDRTLWLCESNG RPDEKEFHAHLHSWQALCHILRDLNSGVNLPGVSLSAAVALLERRSQAIHPPALDRGAALGALMRLEHPNASAEAALTML AQLSPAQSGEALHGLLALARHQLASQPAFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQL PVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788439, Length=759, Percent_Identity=95.6521739130435, Blast_Score=1415, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83309; Mature: 83178
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLIVGIRHHSPACARLVKSLIERQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSY CCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH CQYQDGAAHGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEEDESPGTQEE HHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHH SQALLLRATRMDNSDTLWDHLFEDESQQPALSSALAHYFAQLRGDSPSDALNRQREAFMA HHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH HWIAWAMQQNNGGVLVVCGGWHAPALAKMWRECLQEMNKPELPSLADAVTGCYLTPYSEK HHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEECCCCHH RLDVLAGYLSGMPAPVWQNWCWQSGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC GFGKLAPSTPQPPLPKDVTCELERTGISLPAELTLNRFTPDGLAQSQVLHRLAILEIPGI CCCCCCCCCCCCCCCCCCEEEEHHCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHCCHH VRQHGSTLTLAGNGEERWTLTQPLSQHAALIEAACFGATLQEAARNKLEADMLDAGGISG HHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWQLDEISGMQGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ILQTTLYAAIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLNSGVNLPGVSLSAAV HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALLERRSQAIHPPALDRGAALGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH RHQLASQPAFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SEPLIVGIRHHSPACARLVKSLIERQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSY CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH CQYQDGAAHGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEEDESPGTQEE HHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHH SQALLLRATRMDNSDTLWDHLFEDESQQPALSSALAHYFAQLRGDSPSDALNRQREAFMA HHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH HWIAWAMQQNNGGVLVVCGGWHAPALAKMWRECLQEMNKPELPSLADAVTGCYLTPYSEK HHHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEECCCCHH RLDVLAGYLSGMPAPVWQNWCWQSGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC GFGKLAPSTPQPPLPKDVTCELERTGISLPAELTLNRFTPDGLAQSQVLHRLAILEIPGI CCCCCCCCCCCCCCCCCCEEEEHHCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHCCHH VRQHGSTLTLAGNGEERWTLTQPLSQHAALIEAACFGATLQEAARNKLEADMLDAGGISG HHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWQLDEISGMQGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ILQTTLYAAIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLNSGVNLPGVSLSAAV HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALLERRSQAIHPPALDRGAALGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH RHQLASQPAFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LPVSALQMPLHCPPQAIAHHQQLEQQALASLQHWGVFHV CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]