| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is hisB [H]
Identifier: 218549436
GI number: 218549436
Start: 2131290
End: 2132357
Strand: Direct
Name: hisB [H]
Synonym: EFER_2105
Alternate gene names: 218549436
Gene position: 2131290-2132357 (Clockwise)
Preceding gene: 218549435
Following gene: 218549437
Centisome position: 46.45
GC content: 53.18
Gene sequence:
>1068_bases ATGAGTCAGAAGTATCTTTTTATCGATCGCGATGGAACCCTGATTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTT TGACAAACTCGCCTTTGAACCGGGCGTGATCCCGGAACTGCTGAAGCTGCAAAAAGCGGGCTACAAACTGGTGATGATCA CGAATCAGGATGGTCTGGGAACACAAAGTTTCCCGCAGGCGGATTTCGATGGCCCGCACAACCTGATGATGCAGATCTTC ACCTCACAAGGCGTGCAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCAGATGAGTGTGACTGCCGTAAGCCGAA AGTAAAACTGGTGGAGCGTTATCTGGCTGAGCAAGCGATGGATCGTGCCAACAGTTATGTGATTGGCGATCGCGCGACCG ATATTCAACTGGCCGAAAACATGGGCATTAATGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAA CAGCTCACTAAACGCGATCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGA TCGCGAAGGCGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCACATGCTGGATCAGATTGCTACCCACGGCGGCT TCCGGATGGAAATCAACGTTAAAGGCGACCTCTATATCGACGATCACCACACTGTCGAAGATACCGGTCTGGCGCTGGGC GAAGCGTTAAAAATAGCACTTGGCGACAAACGCGGTATTTGCCGCTTCGGTTTTGTGCTGCCGATGGACGAATGTCTTGC CCGCTGCGCGCTGGATATCTCTGGTCGTCCGCACCTGGAATATAAAGCCGAGTTTACCTACCAGCGCGTGGGCGATCTCA GCACCGAGATGATCGAGCACTTCTTCCGTTCGCTCTCATACACCATGGGCGTGACCCTGCACCTGAAAACCAAAGGTAAA AACGACCACCACCGTGTAGAGAGCCTGTTCAAAGCTTTTGGTCGCACCCTGCGCCAAGCCATCCGCGTGGAAGGCGATAC CCTGCCCTCGTCGAAAGGAGTGCTGTAA
Upstream 100 bases:
>100_bases AGAATAAACAACCCTCTTTAAGCGGCTGCCTGCGAATTACCGTCGGAACCCGTGAAGAAAGCCAGCGCGTCATTGACGCC TTACGTGCGGAGCAAGTTTG
Downstream 100 bases:
>100_bases TGAACGTGGTGATCCTTGATACCGGCTGCGCCAATTTGAACTCGGTGAAGTCTGCCATTGCGCGTCACGGTTATGAACCC AAAGTTAGCCGTGACCCGGA
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF TSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Sequences:
>Translated_355_residues MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF TSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL >Mature_354_residues SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFT SQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQ LTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALGE ALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKN DHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=355, Percent_Identity=99.4366197183099, Blast_Score=735, Evalue=0.0, Organism=Escherichia coli, GI1786399, Length=154, Percent_Identity=32.4675324675325, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324776, Length=165, Percent_Identity=47.8787878787879, Blast_Score=158, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 40264; Mature: 40132
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLG CCCCEEEEECCCCEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCCCC TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLTKRDRYAHVVRNTKETQI HHCCCEEECCCCCCEEEHHCCCCCCEEECHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCHHHHHHHH EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH HHEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHHH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLG CCCEEEEECCCCEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCCCC TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLTKRDRYAHVVRNTKETQI HHCCCEEECCCCCCEEEHHCCCCCCEEECHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCHHHHHHHH EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH HHEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHHH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10222209; 11206551; 11258796 [H]