| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is GP
Identifier: 218549377
GI number: 218549377
Start: 2096748
End: 2098247
Strand: Reverse
Name: GP
Synonym: EFER_2045
Alternate gene names: NA
Gene position: 2098247-2096748 (Counterclockwise)
Preceding gene: 218549378
Following gene: 218549376
Centisome position: 45.73
GC content: 50.27
Gene sequence:
>1500_bases GTGGAACTGGACGCGATTCTTGATAACCTGAGCGACGAAGAGCAAATCGAATTGCTCGAGCTACTCGAAGAAGAAGAGAA CTACCGGAACACACACCTGCTATATGAATTTACGCCATACAGCAAACAGCGTGAGTTCATCGACGCCGGGCATGACTATC CAGAGCGCTGTTTTATGGCTGGTAACCAGCTTGGTAAGTCATTTACTGGTGCTGCTGAAGTAGCGTTTCACCTTACAGGG CGTTATCCGGGCACAAAAGGCTATCCTGCTGATGGTAAATATGGCGGTGAGTGGAAAGGTAAGCGTTTTTATGAGCCTGT TGTCTTCTGGATTGGTGGCGAGACAAACGAGACTGTAACCAAAACGACTCAACGCATCCTGTGCGGTCGTATTGAAGAGA ATGATGAGCCTGGCTACGGTTCCATACCGAAAGAAGACATCATTAGCTGGAAGAAGTCTCCTTTCTTTCCGAACCTTGTT GATCATCTTCTGGTTAAGCATCACACGGCTGATGGCGTTGAAGATGGCATTTCAATCTGCTACTTCAAGCCATACTCGCA AGGCCGTGCTCGCTGGCAGGGTGACACAATCCACGGCGTGTGGTTTGACGAAGAACCACCATACAGCATTTATGGCGAAG GTCTTACCCGTACCAACAAATACGGGCAATTCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACC AAGTTCCTGAAGAATCCAAGCAAGTCGCAGAAAGTGGTCAACATGACCATCTACGACGCTGAGCACTACACCGACGAGCA GAAAGAGCAAATCATCGCATCCTATCCCGAGCATGAGAGAGAGGCTCGTGCTCGCGGTATTCCTACGATGGGTAGCGGTC GAATCTTCCAGATACCGGAAGAGACGATTAAGTGCCAGCCGTTCGAGTGTCCTGATCACTTCTACGTAATTGGCGGGATG GATTTCGGATGGGATCACCCACAGGCGCAGGTTCAGCTTTGGTGGGATAAGGACGCAGACACAATCTACGTTTCACGCGT GTGGAAGGCGAAAGAAAAAACAGCCGTTCAGGCATGGGGAGCTGTTAAATCATGGGCGCATAAAGTGCCAACAGCATGGC CTCATGACGGAAATCAGCACGAGAAGGGCGGCGGTGAGCAGCTCAAAGGGCAGTATGCAGATGCTGGTTTTATGATGTTG CAGGAGCATGCGACATGGCCTGATGGCGGTAACGCGGTGGAGCCTGGCATCACTGAATTGCGCGACATGATGCTCGATGG TCGCTTCAAAGTATTCAACACCTGTGAGCCATTCTTTGAGGAGTTCCGCCTCTATCACCGTGATGAAAACGGGAAAATCG TCAAGCTTAACGATGACGTTCTCTCCGCCGTTCGCTATGCATACATGATGCGCCGCTTCGCCAAAATGATGCGCGACATC AAAAAACCAAAAGAGAAAAAGATACCAGCCCCAATCAGGCCCATCGCACGGAGAACTTAA
Upstream 100 bases:
>100_bases CGTGATTTGGGCCTCAAAGAGCAGTCGCAAGTTGAAGACGTGACACCTGATAAGGGAGATCGCGATAAGCGACGCTCTCG TATCAAGGAGCTATTCAACC
Downstream 100 bases:
>100_bases ATGGCCGATGAAAACAGACTCAATTCCATTCTGTGTAAGTTTGACGCAGACTGGATGGCGAGCGATGAAGCCAGAACCGA GGCGACAAATGACCTGTATT
Product: DNA packaging protein gp2 (Terminase large subunit)
Products: NA
Alternate protein names: Phage DNA Packaging
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTG RYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLV DHLLVKHHTADGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVT KFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGM DFGWDHPQAQVQLWWDKDADTIYVSRVWKAKEKTAVQAWGAVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMML QEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDI KKPKEKKIPAPIRPIARRT
Sequences:
>Translated_499_residues MELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTG RYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLV DHLLVKHHTADGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVT KFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGM DFGWDHPQAQVQLWWDKDADTIYVSRVWKAKEKTAVQAWGAVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMML QEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDI KKPKEKKIPAPIRPIARRT >Mature_499_residues MELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTG RYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLV DHLLVKHHTADGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVT KFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIGGM DFGWDHPQAQVQLWWDKDADTIYVSRVWKAKEKTAVQAWGAVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMML QEHATWPDGGNAVEPGITELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDI KKPKEKKIPAPIRPIARRT
Specific function: Unknown
COG id: COG5565
COG function: function code R; Bacteriophage terminase large (ATPase) subunit and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57496; Mature: 57496
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMA CCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHH GNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETVT HHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCHHH KTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTADGVEDGISIC HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHCCCEEE YFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVT EECCCCCCCCEECCCEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHHHH KFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPE HHHCCCCCCCEEEEEEEECCHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCH ETIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKDADTIYVSRVWKAKEKTAVQAWG HHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHH AVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITEL HHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHEEHHCCCCCCCCCCCCCCHHHH RDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDI HHHHHCCCEEEECCHHHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH KKPKEKKIPAPIRPIARRT CCCHHHCCCCCCCHHCCCC >Mature Secondary Structure MELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMA CCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHH GNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETVT HHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCHHH KTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTADGVEDGISIC HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHCCCEEE YFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVT EECCCCCCCCEECCCEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHHHH KFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPE HHHCCCCCCCEEEEEEEECCHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCH ETIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKDADTIYVSRVWKAKEKTAVQAWG HHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHH AVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGITEL HHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHEEHHCCCCCCCCCCCCCCHHHH RDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAKMMRDI HHHHHCCCEEEECCHHHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH KKPKEKKIPAPIRPIARRT CCCHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA